C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrator complex subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018068 Ints2 10090 - 11:86210681-86257575 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018212 Ints2-001 86210681-86257550 protein_coding
  ENSMUST00000108039 Ints2-002 86212088-86256546 protein_coding
  ENSMUST00000127745 Ints2-009 86235612-86238883 retained_intron
  ENSMUST00000130614 Ints2-004 86256353-86257340 retained_intron
  ENSMUST00000132024 Ints2-005 86255360-86257554 protein_coding
  ENSMUST00000134828 Ints2-011 86217809-86229233 nonsense_mediated_decay
  ENSMUST00000134883 Ints2-008 86234672-86257541 retained_intron
  ENSMUST00000136469 Ints2-003 86256026-86257518 protein_coding
  ENSMUST00000139285 Ints2-007 86251051-86257575 protein_coding
  ENSMUST00000141756 Ints2-006 86256443-86257565 processed_transcript
  ENSMUST00000146421 Ints2-010 86224943-86232176 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000018212ENSMUST00000108039
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000018212 3.331±0.00 2.598±0.25 5.435±0.33 6.833±4.01 2.325±0.36 4.018±0.49 5.064±2.67 4.383±0.34 5.344±1.57 2.630±0.29
ENSMUST00000108039 3.546±1.10 3.084±0.00 N/A 3.226±0.00 2.275±0.00 N/A N/A 4.849±0.42 6.393±0.00 3.360±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0002 UCNEbase 11:85613059-86270571
CIL_00096P CIL_00096P_0002 VISTA 11:85867092-86468104
CIL_0006ZY CIL_0006ZY_0002 CGP 11:86058138-86257575
CIL_00056C CIL_00056C_0003 CGP 11:86210681-86357602

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016180 IEA:ISS snRNA processing
GO:0032039 IEA:ISS integrator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069085 ints2 integrator complex subunit 2 protein_coding Danio_rerio
ENSG00000108506 INTS2 integrator complex subunit 2 protein_coding Homo_sapiens

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