C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018212 Ints2-001 ENSMUSG00000018068 10090 - 11:86210681-86257550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000018212
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000018212 3.331±0.00 2.598±0.25 5.435±0.33 6.833±4.01 2.325±0.36 4.018±0.49 5.064±2.67 4.383±0.34 5.344±1.57 2.630±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0002 UCNEbase 11:85613059-86270571
CIL_00096P CIL_00096P_0002 VISTA 11:85867092-86468104
CIL_0006ZY CIL_0006ZY_0002 CGP 11:86058138-86257575
CIL_00056C CIL_00056C_0003 CGP 11:86210681-86357602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016180 IEA:ISS snRNA processing
GO:0032039 IEA:ISS integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143487 ints2-001 protein_coding Danio_rerio 0 1037
ENSDART00000078791 ints2-201 protein_coding Danio_rerio 0 990
ENST00000251334 INTS2-002 protein_coding Homo_sapiens 0 4608
ENST00000444766 INTS2-001 protein_coding Homo_sapiens 0 4497
ENST00000578805 INTS2-004 retained_intron Homo_sapiens 0 313
ENST00000583076 INTS2-003 protein_coding Homo_sapiens 0 281
ENST00000583822 INTS2-006 retained_intron Homo_sapiens 0 911
ENST00000584967 INTS2-005 retained_intron Homo_sapiens 0 455
ENST00000617492 INTS2-201 protein_coding Homo_sapiens 0 4497

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