C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IKAROS family zinc finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018168 Ikzf3 10090 - 11:98464902-98546031 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103141 Ikzf3-001 98464902-98545800 protein_coding
  ENSMUST00000140876 Ikzf3-002 98484267-98489020 processed_transcript
  ENSMUST00000152400 Ikzf3-003 98512688-98546031 retained_intron
  ENSMUST00000153902 Ikzf3-004 98467258-98477403 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000103141ENSMUST00000140876ENSMUST00000152400ENSMUST00000153902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000103141 0.275±0.24 0.054±0.02 1.027±0.00 0.022±0.02 2.165±0.15 0.529±0.16 0.168±0.10 0.373±0.18 0.079±0.05 0.090±0.16 0.335±0.16 0.068±0.03 0.036±0.02
ENSMUST00000140876 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A 0.079±0.04 N/A 0.050±0.00 0.050±0.00
ENSMUST00000152400 N/A 0.079±0.03 N/A 0.004±0.00 N/A 0.400±0.00 0.024±0.00 N/A 0.050±0.03 N/A 0.198±0.10 N/A N/A
ENSMUST00000153902 N/A 0.620±0.00 N/A 0.032±0.00 N/A 1.173±0.00 0.329±0.00 0.253±0.11 0.293±0.11 0.071±0.03 0.936±0.36 0.191±0.07 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_0002PT CIL_0002PT_0002 CGP 11:98446394-98546031
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PS CIL_0002PS_0002 CGP 11:98464902-98558665

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030888 IMP regulation of B cell proliferation
GO:0042113 IEA B cell activation
GO:0042803 ISS protein homodimerization activity
GO:0042981 ISS regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045577 IMP regulation of B cell differentiation
GO:0045619 IMP regulation of lymphocyte differentiation
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161405 IKZF3 IKAROS family zinc finger 3 (Aiolos) protein_coding Homo_sapiens

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