C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103141 Ikzf3-001 ENSMUSG00000018168 10090 - 11:98464902-98545800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000103141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000103141 0.275±0.24 0.054±0.02 1.027±0.00 0.022±0.02 2.165±0.15 0.529±0.16 0.168±0.10 0.373±0.18 0.079±0.05 0.090±0.16 0.335±0.16 0.068±0.03 0.036±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_0002PT CIL_0002PT_0002 CGP 11:98446394-98546031
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PS CIL_0002PS_0002 CGP 11:98464902-98558665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030888 IMP regulation of B cell proliferation
GO:0042113 IEA B cell activation
GO:0042803 ISS protein homodimerization activity
GO:0042981 ISS regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045577 IMP regulation of B cell differentiation
GO:0045619 IMP regulation of lymphocyte differentiation
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293068 IKZF3-008 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000346243 IKZF3-004 protein_coding Homo_sapiens 0 723
ENST00000346872 IKZF3-001 protein_coding Homo_sapiens 0 1674
ENST00000348427 IKZF3-007 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000350532 IKZF3-005 protein_coding Homo_sapiens 0 752
ENST00000351680 IKZF3-003 protein_coding Homo_sapiens 0 898
ENST00000377944 IKZF3-011 protein_coding Homo_sapiens 0 1013
ENST00000377945 IKZF3-009 protein_coding Homo_sapiens 0 725
ENST00000377952 IKZF3-014 protein_coding Homo_sapiens 0 725
ENST00000377958 IKZF3-012 protein_coding Homo_sapiens 0 1267
ENST00000394189 IKZF3-010 protein_coding Homo_sapiens 0 896
ENST00000439016 IKZF3-015 protein_coding Homo_sapiens 0 898
ENST00000439167 IKZF3-002 protein_coding Homo_sapiens 0 900
ENST00000467757 IKZF3-006 protein_coding Homo_sapiens 0 1016
ENST00000535189 IKZF3-013 protein_coding Homo_sapiens 0 1517
ENST00000583368 IKZF3-016 protein_coding Homo_sapiens 0 896
ENST00000623724 IKZF3-201 protein_coding Homo_sapiens 0 896

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