C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161405-ENSG00000186075 CGP 9606 17:39757721-39877896
GeneTranscriptPositionBiotype
ENSG00000161405 (IKZF3)
IKAROS family zinc finger 3 (Aiolos) 		ENST00000293068 (IKZF3-008) 39765284-39864188 nonsense_mediated_decay
ENST00000346243 (IKZF3-004) 39765790-39864126 protein_coding
ENST00000346872 (IKZF3-001) 39764945-39864188 protein_coding
ENST00000348427 (IKZF3-007) 39765284-39864188 nonsense_mediated_decay
ENST00000350532 (IKZF3-005) 39765790-39864126 protein_coding
ENST00000351680 (IKZF3-003) 39765790-39864126 protein_coding
ENST00000377944 (IKZF3-011) 39765284-39864188 protein_coding
ENST00000377945 (IKZF3-009) 39765284-39864188 protein_coding
ENST00000377952 (IKZF3-014) 39765284-39864188 protein_coding
ENST00000377958 (IKZF3-012) 39765284-39864188 protein_coding
ENST00000394189 (IKZF3-010) 39765284-39864188 protein_coding
ENST00000439016 (IKZF3-015) 39765790-39864127 protein_coding
ENST00000439167 (IKZF3-002) 39765284-39864188 protein_coding
ENST00000467757 (IKZF3-006) 39765790-39864126 protein_coding
ENST00000535189 (IKZF3-013) 39765284-39864188 protein_coding
ENST00000583368 (IKZF3-016) 39765496-39778225 protein_coding
ENST00000623724 (IKZF3-201) 39757721-39864188 protein_coding
ENSG00000186075 (ZPBP2)
zona pellucida binding protein 2 		ENST00000348931 (ZPBP2-002) 39868164-39877144 protein_coding
ENST00000377940 (ZPBP2-001) 39868216-39877896 protein_coding
ENST00000583811 (ZPBP2-004) 39868216-39876802 protein_coding
ENST00000584588 (ZPBP2-003) 39868216-39877149 protein_coding
ENSG00000226117 (AC079199.2)
 ENST00000422019 (AC079199.2-001) 39839369-39839524 processed_pseudogene
ENSG00000264198 (RP11-94L15.2)
 ENST00000488188 (RP11-94L15.2-001) 39757715-39763836 lincRNA
ENSG00000264663 (KRT8P34)
keratin 8 pseudogene 34 		ENST00000577607 (KRT8P34-001) 39835037-39836080 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0002PS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018168-ENSMUSG00000017195 CGP 10090 11:98464902-98558665
GeneTranscriptPositionBiotype
ENSMUSG00000017195 (Zpbp2)
zona pellucida binding protein 2 		ENSMUST00000017339 (Zpbp2-003) 98551152-98558656 protein_coding
ENSMUST00000081033 (Zpbp2-201) 98551097-98558665 protein_coding
ENSMUST00000107509 (Zpbp2-002) 98551150-98558656 protein_coding
ENSMUST00000107511 (Zpbp2-001) 98551130-98558665 protein_coding
ENSMUST00000107513 (Zpbp2-004) 98551178-98558533 protein_coding
ENSMUST00000126236 (Zpbp2-005) 98555443-98558385 processed_transcript
ENSMUSG00000018168 (Ikzf3)
IKAROS family zinc finger 3 		ENSMUST00000103141 (Ikzf3-001) 98464902-98545800 protein_coding
ENSMUST00000140876 (Ikzf3-002) 98484267-98489020 processed_transcript
ENSMUST00000152400 (Ikzf3-003) 98512688-98546031 retained_intron
ENSMUST00000153902 (Ikzf3-004) 98467258-98477403 processed_transcript
ENSMUSG00000084621 (Gm25106)
predicted gene, 25106 		ENSMUST00000122672 (Gm25106-201) 98473675-98473808 snRNA

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PS_0001ENSG00000161405ENST00000293068ENST00000346243ENST00000346872ENST00000348427ENST00000350532ENST00000351680ENST00000377944ENST00000377945ENST00000377952ENST00000377958ENST00000394189ENST00000439016ENST00000439167ENST00000467757ENST00000535189ENST00000583368ENST00000623724ENSG00000186075ENST00000348931ENST00000377940ENST00000583811ENST00000584588ENSG00000226117ENST00000422019ENSG00000264198ENST00000488188ENSG00000264663ENST00000577607CIL_0002PS_0002ENSMUSG00000017195ENSMUST00000017339ENSMUST00000081033ENSMUST00000107509ENSMUST00000107511ENSMUST00000107513ENSMUST00000126236ENSMUSG00000018168ENSMUST00000103141ENSMUST00000140876ENSMUST00000152400ENSMUST00000153902ENSMUSG00000084621ENSMUST00000122672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PS_0001ENSG00000161405ENST00000293068ENST00000346872ENST00000348427ENST00000377952ENST00000583368ENST00000623724ENSG00000186075ENST00000348931ENST00000377940ENST00000583811ENST00000584588ENSG00000226117ENST00000422019ENSG00000264198ENST00000488188ENSG00000264663ENST00000577607CIL_0002PS_0002ENSMUSG00000017195ENSMUST00000017339ENSMUST00000081033ENSMUST00000107509ENSMUST00000107511ENSMUST00000107513ENSMUST00000126236ENSMUSG00000018168ENSMUST00000103141ENSMUST00000140876ENSMUST00000152400ENSMUST00000153902ENSMUSG00000084621ENSMUST00000122672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161405 ENST00000293068 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346872 N/A N/A 0.322±0.00 N/A 1.367±0.00 1.763±0.00 N/A 0.289±0.00 0.344±0.00 2.277±0.00 N/A N/A N/A 0.552±0.00
ENST00000348427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A
ENST00000350532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000351680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377952 N/A N/A N/A N/A N/A N/A 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000377958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583368 N/A N/A N/A N/A 1.708±0.00 N/A N/A 1.657±0.00 0.935±0.00 2.145±0.00 N/A N/A N/A N/A
ENST00000623724 0.207±0.00 N/A 0.013±0.00 0.035±0.00 0.242±0.00 0.126±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.261±0.00
ENSG00000186075 ENST00000348931 N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.709±0.00
ENST00000377940 0.013±0.00 0.136±0.00 N/A 0.004±0.00 N/A N/A N/A 0.004±0.00 N/A N/A 0.030±0.00 0.014±0.00 N/A 11.386±7.17
ENST00000583811 N/A 0.099±0.00 N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 16.170±0.00
ENST00000584588 N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226117 ENST00000422019 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.599±1.51 0.090±0.00 N/A N/A N/A
ENSG00000264198 ENST00000488188 N/A 10.721±0.00 0.027±0.00 N/A 0.205±0.00 0.069±0.00 N/A 0.203±0.00 0.160±0.00 0.651±0.00 0.046±0.00 0.528±0.40 0.173±0.12 0.890±0.00
ENSG00000264663 ENST00000577607 N/A 0.397±0.00 N/A N/A 0.112±0.00 0.071±0.00 0.025±0.00 N/A 0.047±0.00 0.221±0.18 N/A 0.169±0.00 0.045±0.00 0.108±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017195 ENSMUST00000017339 N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 0.118±0.07 N/A N/A N/A N/A 73.158±7.66
ENSMUST00000081033 0.116±0.02 0.179±0.02 N/A 0.022±0.00 0.248±0.10 N/A 0.086±0.03 0.114±0.00 0.091±0.04 0.090±0.00 N/A 0.148±0.03 0.140±0.14 59.630±19.70
ENSMUST00000107509 0.126±0.02 0.098±0.04 N/A 0.048±0.00 0.141±0.10 0.183±0.00 0.044±0.00 0.041±0.01 0.046±0.02 0.048±0.01 N/A 0.145±0.07 0.013±0.00 24.477±3.06
ENSMUST00000107511 N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A 0.098±0.05 N/A N/A 0.137±0.00 0.011±0.00 N/A
ENSMUST00000107513 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 0.137±0.00 0.045±0.00 0.161±0.00 0.074±0.00 38.201±0.00
ENSMUST00000126236 0.202±0.00 0.269±0.12 N/A 0.065±0.00 0.450±0.19 N/A N/A 0.177±0.07 0.122±0.02 0.098±0.00 0.054±0.00 0.312±0.11 0.162±0.08 N/A
ENSMUSG00000018168 ENSMUST00000103141 0.275±0.24 0.054±0.02 1.027±0.00 0.022±0.02 2.165±0.15 0.529±0.16 0.168±0.10 0.373±0.18 0.079±0.05 N/A 0.090±0.16 0.335±0.16 0.068±0.03 0.036±0.02
ENSMUST00000140876 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.079±0.04 N/A 0.050±0.00 0.050±0.00
ENSMUST00000152400 N/A 0.079±0.03 N/A 0.004±0.00 N/A 0.400±0.00 0.024±0.00 N/A 0.050±0.03 N/A N/A 0.198±0.10 N/A N/A
ENSMUST00000153902 N/A 0.620±0.00 N/A 0.032±0.00 N/A 1.173±0.00 0.329±0.00 0.253±0.11 0.293±0.11 N/A 0.071±0.03 0.936±0.36 0.191±0.07 0.042±0.00
ENSMUSG00000084621 ENSMUST00000122672 N/A N/A 13.505±2.75 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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