C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141738-ENSG00000161405 CGP 9606 17:39737927-39864188
GeneTranscriptPositionBiotype
ENSG00000141738 (GRB7)
growth factor receptor-bound protein 7 		ENST00000309156 (GRB7-001) 39737927-39747284 protein_coding
ENST00000394204 (GRB7-003) 39742252-39747003 protein_coding
ENST00000394209 (GRB7-009) 39739967-39746988 protein_coding
ENST00000394211 (GRB7-002) 39738337-39747285 protein_coding
ENST00000445327 (GRB7-006) 39738771-39747291 protein_coding
ENST00000461756 (GRB7-004) 39742934-39743612 retained_intron
ENST00000473071 (GRB7-007) 39743272-39744428 retained_intron
ENST00000485182 (GRB7-005) 39737949-39743054 retained_intron
ENST00000577695 (GRB7-011) 39737927-39742922 protein_coding
ENST00000578702 (GRB7-014) 39738353-39744103 processed_transcript
ENST00000583813 (GRB7-012) 39737962-39743281 nonsense_mediated_decay
ENST00000584053 (GRB7-013) 39740132-39742894 retained_intron
ENST00000584819 (GRB7-008) 39738306-39744604 retained_intron
ENST00000584853 (GRB7-010) 39737974-39738982 processed_transcript
ENSG00000161405 (IKZF3)
IKAROS family zinc finger 3 (Aiolos) 		ENST00000293068 (IKZF3-008) 39765284-39864188 nonsense_mediated_decay
ENST00000346243 (IKZF3-004) 39765790-39864126 protein_coding
ENST00000346872 (IKZF3-001) 39764945-39864188 protein_coding
ENST00000348427 (IKZF3-007) 39765284-39864188 nonsense_mediated_decay
ENST00000350532 (IKZF3-005) 39765790-39864126 protein_coding
ENST00000351680 (IKZF3-003) 39765790-39864126 protein_coding
ENST00000377944 (IKZF3-011) 39765284-39864188 protein_coding
ENST00000377945 (IKZF3-009) 39765284-39864188 protein_coding
ENST00000377952 (IKZF3-014) 39765284-39864188 protein_coding
ENST00000377958 (IKZF3-012) 39765284-39864188 protein_coding
ENST00000394189 (IKZF3-010) 39765284-39864188 protein_coding
ENST00000439016 (IKZF3-015) 39765790-39864127 protein_coding
ENST00000439167 (IKZF3-002) 39765284-39864188 protein_coding
ENST00000467757 (IKZF3-006) 39765790-39864126 protein_coding
ENST00000535189 (IKZF3-013) 39765284-39864188 protein_coding
ENST00000583368 (IKZF3-016) 39765496-39778225 protein_coding
ENST00000623724 (IKZF3-201) 39757721-39864188 protein_coding
ENSG00000226117 (AC079199.2)
 ENST00000422019 (AC079199.2-001) 39839369-39839524 processed_pseudogene
ENSG00000264198 (RP11-94L15.2)
 ENST00000488188 (RP11-94L15.2-001) 39757715-39763836 lincRNA
ENSG00000264663 (KRT8P34)
keratin 8 pseudogene 34 		ENST00000577607 (KRT8P34-001) 39835037-39836080 processed_pseudogene
CIL_0002PT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019312-ENSMUSG00000018168 CGP 10090 11:98446394-98546031
GeneTranscriptPositionBiotype
ENSMUSG00000018168 (Ikzf3)
IKAROS family zinc finger 3 		ENSMUST00000103141 (Ikzf3-001) 98464902-98545800 protein_coding
ENSMUST00000140876 (Ikzf3-002) 98484267-98489020 processed_transcript
ENSMUST00000152400 (Ikzf3-003) 98512688-98546031 retained_intron
ENSMUST00000153902 (Ikzf3-004) 98467258-98477403 processed_transcript
ENSMUSG00000019312 (Grb7)
growth factor receptor bound protein 7 		ENSMUST00000019456 (Grb7-001) 98446834-98455373 protein_coding
ENSMUST00000127914 (Grb7-006) 98447048-98455373 retained_intron
ENSMUST00000129034 (Grb7-003) 98453789-98455125 retained_intron
ENSMUST00000132771 (Grb7-002) 98446394-98451417 protein_coding
ENSMUST00000133419 (Grb7-004) 98451842-98453822 retained_intron
ENSMUST00000156328 (Grb7-005) 98447068-98455373 retained_intron
ENSMUSG00000084621 (Gm25106)
predicted gene, 25106 		ENSMUST00000122672 (Gm25106-201) 98473675-98473808 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PT_0001ENSG00000141738ENST00000309156ENST00000394204ENST00000394209ENST00000394211ENST00000445327ENST00000461756ENST00000485182ENST00000578702ENST00000583813ENST00000584053ENST00000584819ENST00000584853ENSG00000161405ENST00000293068ENST00000346872ENST00000348427ENST00000377952ENST00000583368ENST00000623724ENSG00000226117ENST00000422019ENSG00000264198ENST00000488188ENSG00000264663ENST00000577607CIL_0002PT_0002ENSMUSG00000018168ENSMUST00000103141ENSMUST00000140876ENSMUST00000152400ENSMUST00000153902ENSMUSG00000019312ENSMUST00000019456ENSMUST00000127914ENSMUST00000129034ENSMUST00000132771ENSMUST00000133419ENSMUST00000156328ENSMUSG00000084621ENSMUST00000122672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141738 ENST00000309156 N/A N/A N/A N/A 0.499±0.00 N/A N/A N/A 0.189±0.00 N/A N/A 4.406±3.12 4.854±0.82 N/A
ENST00000394204 N/A 0.083±0.00 N/A N/A 0.982±0.00 N/A 0.273±0.07 4.341±0.00 N/A N/A 0.014±0.00 0.970±0.00 N/A 0.792±0.00
ENST00000394209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.414±0.00 0.974±0.00 N/A
ENST00000394211 N/A N/A N/A N/A N/A N/A N/A 11.088±0.00 0.482±0.22 17.318±0.00 N/A 2.325±1.77 6.894±1.74 1.203±0.00
ENST00000445327 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 0.895±0.00 N/A N/A N/A N/A
ENST00000461756 N/A N/A N/A N/A N/A 1.532±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485182 N/A N/A 1.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578702 N/A N/A N/A N/A N/A 1.254±0.00 N/A 1.605±0.00 2.576±0.00 N/A N/A 14.667±0.00 N/A N/A
ENST00000583813 N/A N/A N/A N/A N/A 1.408±0.11 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584053 N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000584819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00
ENST00000584853 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161405 ENST00000293068 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346872 N/A N/A 0.322±0.00 N/A 1.367±0.00 1.763±0.00 N/A 0.289±0.00 0.344±0.00 2.277±0.00 N/A N/A N/A 0.552±0.00
ENST00000348427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A
ENST00000350532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000351680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377952 N/A N/A N/A N/A N/A N/A 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000377958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583368 N/A N/A N/A N/A 1.708±0.00 N/A N/A 1.657±0.00 0.935±0.00 2.145±0.00 N/A N/A N/A N/A
ENST00000623724 0.207±0.00 N/A 0.013±0.00 0.035±0.00 0.242±0.00 0.126±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.261±0.00
ENSG00000226117 ENST00000422019 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.599±1.51 0.090±0.00 N/A N/A N/A
ENSG00000264198 ENST00000488188 N/A 10.721±0.00 0.027±0.00 N/A 0.205±0.00 0.069±0.00 N/A 0.203±0.00 0.160±0.00 0.651±0.00 0.046±0.00 0.528±0.40 0.173±0.12 0.890±0.00
ENSG00000264663 ENST00000577607 N/A 0.397±0.00 N/A N/A 0.112±0.00 0.071±0.00 0.025±0.00 N/A 0.047±0.00 0.221±0.18 N/A 0.169±0.00 0.045±0.00 0.108±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018168 ENSMUST00000103141 0.275±0.24 0.054±0.02 1.027±0.00 0.022±0.02 2.165±0.15 0.529±0.16 0.168±0.10 0.373±0.18 0.079±0.05 N/A 0.090±0.16 0.335±0.16 0.068±0.03 0.036±0.02
ENSMUST00000140876 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.079±0.04 N/A 0.050±0.00 0.050±0.00
ENSMUST00000152400 N/A 0.079±0.03 N/A 0.004±0.00 N/A 0.400±0.00 0.024±0.00 N/A 0.050±0.03 N/A N/A 0.198±0.10 N/A N/A
ENSMUST00000153902 N/A 0.620±0.00 N/A 0.032±0.00 N/A 1.173±0.00 0.329±0.00 0.253±0.11 0.293±0.11 N/A 0.071±0.03 0.936±0.36 0.191±0.07 0.042±0.00
ENSMUSG00000019312 ENSMUST00000019456 5.236±3.96 0.452±0.08 12.568±3.83 0.424±0.13 9.334±2.71 47.003±5.41 0.180±0.12 56.833±5.01 38.522±19.49 14.710±1.38 0.072±0.00 3.955±2.14 8.961±7.90 0.739±0.25
ENSMUST00000127914 1.296±0.80 N/A 5.387±1.04 0.059±0.00 2.408±0.36 8.725±1.35 N/A N/A 3.795±1.67 4.126±0.30 0.071±0.00 1.283±0.05 2.529±1.26 0.286±0.06
ENSMUST00000129034 0.521±0.00 N/A N/A N/A 3.612±1.25 N/A 0.145±0.02 N/A N/A N/A 0.117±0.05 2.131±0.02 N/A 0.435±0.00
ENSMUST00000132771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A
ENSMUST00000133419 N/A 0.374±0.10 N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A 0.135±0.00 N/A N/A N/A
ENSMUST00000156328 N/A N/A 3.208±0.00 N/A N/A N/A 0.047±0.02 N/A N/A N/A 0.053±0.02 1.501±0.00 0.849±0.00 0.178±0.00
ENSMUSG00000084621 ENSMUST00000122672 N/A N/A 13.505±2.75 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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