C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member B4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019143 Slc35b4-001 ENSMUSG00000018999 10090 - 6:34153380-34177111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019143 5.940±2.48 3.411±0.33 2.079±0.19 2.861±1.06 5.863±0.81 3.579±0.32 1.117±0.20 16.032±0.88 2.020±1.45 4.852±0.24 0.217±0.04 4.133±0.76 2.269±0.66 2.005±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GV CIL_0002GV_0002 CGP 6:34029448-34177111
CIL_0002GW CIL_0002GW_0002 CGP 6:34153380-34317497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005462 IEA UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 IEA UDP-xylose transmembrane transporter activity
GO:0005794 IEA Golgi apparatus
GO:0006111 IMP regulation of gluconeogenesis
GO:0008643 IEA carbohydrate transport
GO:0015788 IEA UDP-N-acetylglucosamine transport
GO:0015790 IEA UDP-xylose transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378509 SLC35B4-001 protein_coding Homo_sapiens 0 1271
ENST00000416907 SLC35B4-002 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000470969 SLC35B4-003 retained_intron Homo_sapiens 0 909

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