C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoplasmic FMR1 interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020340 Cyfip2 10090 - 11:46193850-46312859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093165 Cyfip2-201 46193850-46312859 protein_coding
  ENSMUST00000093166 Cyfip2-001 46193855-46312294 protein_coding
  ENSMUST00000129474 Cyfip2-003 46291577-46312220 protein_coding
  ENSMUST00000142017 Cyfip2-002 46196071-46270669 protein_coding
  ENSMUST00000165599 Cyfip2-202 46193850-46312358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093165ENSMUST00000093166ENSMUST00000142017ENSMUST00000165599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093165 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000093166 0.657±0.50 16.684±3.78 3.195±0.77 43.008±41.48 4.588±2.60 1.132±0.54 8.937±0.97 25.471±1.24 1.185±0.78 2.894±0.93 1.038±0.58 12.058±7.14 4.592±1.86 0.196±0.15
ENSMUST00000142017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.468±0.13 N/A 1.487±0.22 0.383±0.15
ENSMUST00000165599 0.143±0.10 5.749±1.00 N/A N/A 1.864±0.80 0.659±0.00 2.898±0.67 8.052±0.60 0.110±0.02 0.971±0.16 N/A 3.541±0.41 N/A 0.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267
CIL_00023S CIL_00023S_0002 CGP 11:46193850-46312859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0006915 ISS apoptotic process
GO:0016020 IEA membrane
GO:0016337 ISS single organismal cell-cell adhesion
GO:0030054 IEA cell junction
GO:0043005 ISS neuron projection
GO:0045202 ISA synapse
GO:0045862 IEA positive regulation of proteolysis
GO:0048471 ISS perinuclear region of cytoplasm
GO:0070062 IEA extracellular vesicular exosome
GO:0097202 IEA activation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036375 cyfip2 cytoplasmic FMR1 interacting protein 2 protein_coding Danio_rerio
ENSG00000055163 CYFIP2 cytoplasmic FMR1 interacting protein 2 protein_coding Homo_sapiens

Loading