C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000055163-ENSG00000055163 CGP 9606 5:157266079-157395598
GeneTranscriptPositionBiotype
ENSG00000055163 (CYFIP2)
cytoplasmic FMR1 interacting protein 2 		ENST00000435847 (CYFIP2-006) 157266123-157393223 protein_coding
ENST00000518456 (CYFIP2-026) 157269375-157271576 processed_transcript
ENST00000518511 (CYFIP2-027) 157300818-157303123 retained_intron
ENST00000518555 (CYFIP2-019) 157325600-157328049 retained_intron
ENST00000519663 (CYFIP2-011) 157383256-157393233 retained_intron
ENST00000520424 (CYFIP2-020) 157327925-157341094 retained_intron
ENST00000520942 (CYFIP2-017) 157311038-157314370 retained_intron
ENST00000520960 (CYFIP2-018) 157323921-157328010 nonsense_mediated_decay
ENST00000521420 (CYFIP2-001) 157266128-157395595 protein_coding
ENST00000522463 (CYFIP2-007) 157266123-157393207 protein_coding
ENST00000522637 (CYFIP2-012) 157266128-157304274 nonsense_mediated_decay
ENST00000522775 (CYFIP2-025) 157384306-157390638 retained_intron
ENST00000522884 (CYFIP2-024) 157384306-157389542 retained_intron
ENST00000522892 (CYFIP2-021) 157361405-157383580 retained_intron
ENST00000523383 (CYFIP2-022) 157383232-157393233 retained_intron
ENST00000524058 (CYFIP2-023) 157383238-157389628 retained_intron
ENST00000541131 (CYFIP2-201) 157266177-157395598 protein_coding
ENST00000611075 (CYFIP2-014) 157266174-157300893 protein_coding
ENST00000611925 (CYFIP2-015) 157266711-157302890 protein_coding
ENST00000616178 (CYFIP2-003) 157266079-157393233 protein_coding
ENST00000617629 (CYFIP2-013) 157266139-157307864 protein_coding
ENST00000618329 (CYFIP2-002) 157269342-157393229 protein_coding
ENST00000620254 (CYFIP2-008) 157266081-157393224 protein_coding
ENST00000620969 (CYFIP2-202) 157266140-157393233 protein_coding
ENST00000621516 (CYFIP2-016) 157277059-157304300 nonsense_mediated_decay
ENST00000622696 (CYFIP2-004) 157266136-157304782 retained_intron
ENSG00000135074 (ADAM19)
ADAM metallopeptidase domain 19 		ENST00000257527 (ADAM19-001) 157477304-157575775 protein_coding
ENST00000517374 (ADAM19-004) 157477304-157502822 protein_coding
ENST00000517905 (ADAM19-003) 157481227-157575741 protein_coding
ENST00000517951 (ADAM19-002) 157395534-157575775 nonsense_mediated_decay
ENST00000519752 (ADAM19-005) 157570446-157575757 retained_intron
ENSG00000172568 (FNDC9)
fibronectin type III domain containing 9 		ENST00000312349 (FNDC9-001) 157341600-157345721 protein_coding
ENST00000520782 (FNDC9-002) 157342996-157345564 protein_coding
ENSG00000251405 (CTB-109A12.1)
 ENST00000509655 (CTB-109A12.1-001) 157363382-157365501 sense_overlapping
ENST00000519499 (CTB-109A12.1-002) 157362615-157460078 sense_overlapping
CIL_00023S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020340-ENSMUSG00000020340 CGP 10090 11:46193850-46312859
GeneTranscriptPositionBiotype
ENSMUSG00000020340 (Cyfip2)
cytoplasmic FMR1 interacting protein 2 		ENSMUST00000093165 (Cyfip2-201) 46193850-46312859 protein_coding
ENSMUST00000093166 (Cyfip2-001) 46193855-46312294 protein_coding
ENSMUST00000129474 (Cyfip2-003) 46291577-46312220 protein_coding
ENSMUST00000142017 (Cyfip2-002) 46196071-46270669 protein_coding
ENSMUST00000165599 (Cyfip2-202) 46193850-46312358 protein_coding
ENSMUSG00000048721 (Fndc9)
fibronectin type III domain containing 9 		ENSMUST00000060185 (Fndc9-001) 46235531-46239872 protein_coding
ENSMUSG00000081078 (Gm12568)
predicted gene 12568 		ENSMUST00000117362 (Gm12568-001) 46243571-46244194 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023S_0001ENSG00000055163ENST00000435847ENST00000519663ENST00000521420ENST00000522463ENST00000541131ENST00000618329ENST00000620254ENSG00000135074ENST00000257527ENST00000517951ENSG00000172568ENST00000312349ENST00000520782ENSG00000251405ENST00000509655ENST00000519499CIL_00023S_0002ENSMUSG00000020340ENSMUST00000093165ENSMUST00000093166ENSMUST00000142017ENSMUST00000165599ENSMUSG00000048721ENSMUST00000060185ENSMUSG00000081078ENSMUST00000117362
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055163 ENST00000435847 N/A N/A N/A N/A N/A 1.536±0.00 N/A N/A N/A N/A 0.732±0.00 2.028±0.00 N/A 1.265±0.00
ENST00000518456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519663 4.224±0.00 53.850±0.00 N/A N/A N/A 7.247±0.00 N/A N/A N/A N/A 2.379±0.00 N/A 16.286±0.00 23.314±0.00
ENST00000520424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521420 0.530±0.00 N/A N/A 4.875±0.00 N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A 1.733±0.00 N/A
ENST00000522463 N/A N/A N/A N/A N/A N/A N/A N/A 2.926±0.00 N/A N/A N/A N/A 2.506±0.00
ENST00000522637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541131 N/A 4.647±0.00 17.873±0.00 19.610±1.29 1.015±0.00 N/A 1.232±0.64 8.007±7.02 N/A N/A N/A 1.400±0.41 N/A N/A
ENST00000611075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618329 N/A N/A 13.569±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620254 1.100±0.00 N/A N/A 20.190±4.31 0.685±0.00 1.729±0.00 2.671±1.50 12.898±8.69 4.218±0.00 10.133±0.00 N/A 2.270±1.62 4.811±0.00 2.363±1.28
ENST00000620969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135074 ENST00000257527 0.963±0.00 8.025±0.00 N/A N/A 1.849±0.88 1.888±0.03 0.897±0.48 N/A 8.506±0.00 4.524±2.96 0.624±0.36 2.595±1.01 22.798±13.29 1.742±0.04
ENST00000517374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517951 N/A N/A N/A N/A N/A N/A 0.883±0.00 N/A N/A 2.558±0.00 N/A N/A N/A N/A
ENST00000519752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172568 ENST00000312349 N/A 0.108±0.00 1.751±0.00 1.926±1.67 N/A 0.394±0.08 0.027±0.00 N/A N/A 0.515±0.00 N/A N/A N/A 0.023±0.00
ENST00000520782 N/A N/A N/A N/A 0.633±0.00 0.467±0.00 0.174±0.00 N/A N/A 0.532±0.00 N/A 0.071±0.01 N/A 0.024±0.00
ENSG00000251405 ENST00000509655 N/A 0.293±0.00 0.339±0.00 N/A 0.194±0.00 N/A 0.104±0.00 0.334±0.27 0.010±0.00 0.326±0.00 N/A 0.043±0.02 0.077±0.05 0.026±0.00
ENST00000519499 N/A 0.694±0.00 N/A N/A 0.398±0.00 N/A 0.094±0.05 N/A N/A 0.533±0.00 0.079±0.00 0.114±0.09 0.472±0.00 0.051±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020340 ENSMUST00000093165 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000093166 0.657±0.50 16.684±3.78 3.195±0.77 43.008±41.48 4.588±2.60 1.132±0.54 8.937±0.97 25.471±1.24 1.185±0.78 2.894±0.93 1.038±0.58 12.058±7.14 4.592±1.86 0.196±0.15
ENSMUST00000129474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.468±0.13 N/A 1.487±0.22 0.383±0.15
ENSMUST00000165599 0.143±0.10 5.749±1.00 N/A N/A 1.864±0.80 0.659±0.00 2.898±0.67 8.052±0.60 0.110±0.02 0.971±0.16 N/A 3.541±0.41 N/A 0.138±0.00
ENSMUSG00000048721 ENSMUST00000060185 0.031±0.02 0.233±0.13 0.098±0.00 1.001±0.18 0.188±0.00 0.065±0.03 0.044±0.00 0.726±0.06 0.164±0.13 0.751±0.59 0.055±0.03 0.433±0.23 0.550±0.19 0.216±0.10
ENSMUSG00000081078 ENSMUST00000117362 0.077±0.01 N/A 0.117±0.00 0.226±0.07 0.187±0.00 N/A N/A 0.112±0.03 0.105±0.09 0.079±0.00 0.068±0.00 0.261±0.11 0.061±0.01 0.041±0.02

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