C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytoplasmic FMR1 interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142017 Cyfip2-002 ENSMUSG00000020340 10090 - 11:46196071-46270669 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENSMUST00000142017
Transcript ID Muscle Placenta Testis
ENSMUST00000142017 0.468±0.13 1.487±0.22 0.383±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267
CIL_00023S CIL_00023S_0002 CGP 11:46193850-46312859

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104233 cyfip1-201 protein_coding Danio_rerio 0 1155
ENSDART00000065127 cyfip1-001 protein_coding Danio_rerio 0 1155
ENST00000435847 CYFIP2-006 protein_coding Homo_sapiens 0 2867
ENST00000518555 CYFIP2-019 retained_intron Homo_sapiens 0 239
ENST00000519663 CYFIP2-011 retained_intron Homo_sapiens 0 979
ENST00000520424 CYFIP2-020 retained_intron Homo_sapiens 0 719
ENST00000520960 CYFIP2-018 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000521420 CYFIP2-001 protein_coding Homo_sapiens 0 2868
ENST00000522463 CYFIP2-007 protein_coding Homo_sapiens 0 2846
ENST00000522892 CYFIP2-021 retained_intron Homo_sapiens 0 394
ENST00000523383 CYFIP2-022 retained_intron Homo_sapiens 0 979
ENST00000541131 CYFIP2-201 protein_coding Homo_sapiens 0 2868
ENST00000561263 CYFIP1-015 protein_coding Homo_sapiens 0 388
ENST00000610365 CYFIP1-003 protein_coding Homo_sapiens 0 1380
ENST00000616178 CYFIP2-003 protein_coding Homo_sapiens 0 3893
ENST00000617556 CYFIP1-004 protein_coding Homo_sapiens 0 1380
ENST00000617928 CYFIP1-001 protein_coding Homo_sapiens 0 1380
ENST00000618329 CYFIP2-002 protein_coding Homo_sapiens 0 2868
ENST00000619348 CYFIP1-005 retained_intron Homo_sapiens 0 928
ENST00000620254 CYFIP2-008 protein_coding Homo_sapiens 0 2868
ENST00000620969 CYFIP2-202 protein_coding Homo_sapiens 0 2002

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