C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IG
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020437 Myo1g 10090 - 11:6506548-6520965 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003459 Myo1g-001 6506548-6520958 protein_coding
  ENSMUST00000131823 Myo1g-006 6514503-6515500 retained_intron
  ENSMUST00000134489 Myo1g-003 6519047-6519504 protein_coding
  ENSMUST00000134639 Myo1g-007 6507869-6508685 retained_intron
  ENSMUST00000144725 Myo1g-002 6506674-6520897 nonsense_mediated_decay
  ENSMUST00000146536 Myo1g-005 6517998-6520965 nonsense_mediated_decay
  ENSMUST00000156878 Myo1g-004 6512964-6520958 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003459ENSMUST00000131823ENSMUST00000144725ENSMUST00000146536ENSMUST00000156878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003459 5.437±0.29 1.456±0.25 4.019±0.47 0.168±0.01 24.959±12.44 2.872±0.83 1.264±0.69 2.174±1.10 3.464±3.22 12.014±1.80 0.278±0.25 1.885±0.71 2.570±2.17 0.066±0.05
ENSMUST00000131823 N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144725 N/A 0.465±0.00 N/A 0.133±0.00 10.299±3.25 1.380±0.33 N/A N/A 0.393±0.08 N/A 0.070±0.00 0.582±0.16 0.916±0.07 0.118±0.09
ENSMUST00000146536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A 0.217±0.00
ENSMUST00000156878 0.687±0.03 N/A 0.387±0.04 0.008±0.00 2.450±0.00 N/A 0.064±0.00 0.241±0.13 N/A 1.823±0.00 0.091±0.10 0.208±0.09 0.625±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SE CIL_0000SE_0002 CGP 11:6467599-6520965
CIL_0000SD CIL_0000SD_0002 CGP 11:6506548-6596744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001891 IDA phagocytic cup
GO:0002456 IMP T cell mediated immunity
GO:0003674 ND molecular_function
GO:0003774 TAS motor activity
GO:0003779 IEA actin binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0006887 IMP exocytosis
GO:0006909 IMP phagocytosis
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016459 IEA myosin complex
GO:0030027 IDA lamellipodium
GO:0030175 IDA filopodium
GO:0031256 IDA leading edge membrane
GO:0031589 IMP cell-substrate adhesion
GO:0038096 IMP Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071976 IMP cell gliding
GO:0072678 IMP T cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036104 MYO1G myosin IG protein_coding Danio_rerio
ENSG00000136286 MYO1G myosin IG protein_coding Homo_sapiens

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