C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myosin IG
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146536 Myo1g-005 ENSMUSG00000020437 10090 - 11:6517998-6520965 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENSMUST00000146536
Transcript ID Muscle Testis
ENSMUST00000146536 0.135±0.00 0.217±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SE CIL_0000SE_0002 CGP 11:6467599-6520965
CIL_0000SD CIL_0000SD_0002 CGP 11:6506548-6596744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001891 IDA phagocytic cup
GO:0003674 ND molecular_function
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0006887 IMP exocytosis
GO:0006909 IMP phagocytosis
GO:0030027 IDA lamellipodium
GO:0030175 IDA filopodium
GO:0031256 IDA leading edge membrane
GO:0031589 IMP cell-substrate adhesion
GO:0071976 IMP cell gliding
GO:0072678 IMP T cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258787 MYO1G-001 protein_coding Homo_sapiens 0 346
ENST00000464434 MYO1G-002 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000480503 MYO1G-005 retained_intron Homo_sapiens 0 346
ENST00000483585 MYO1G-003 retained_intron Homo_sapiens 0 346
ENST00000495831 MYO1G-007 nonsense_mediated_decay Homo_sapiens 2.00386e-43 182

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