C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IG
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156878 Myo1g-004 ENSMUSG00000020437 10090 - 11:6512964-6520958 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000156878
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000156878 0.687±0.03 0.387±0.04 0.008±0.00 2.450±0.00 0.064±0.00 0.241±0.13 1.823±0.00 0.091±0.10 0.208±0.09 0.625±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SE CIL_0000SE_0002 CGP 11:6467599-6520965
CIL_0000SD CIL_0000SD_0002 CGP 11:6506548-6596744

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258787 MYO1G-001 protein_coding Homo_sapiens 0 1061
ENST00000359786 MYO1C-001 protein_coding Homo_sapiens 1e-28 134
ENST00000361007 MYO1C-201 protein_coding Homo_sapiens 1e-28 134
ENST00000397274 MYO9B-201 protein_coding Homo_sapiens 0.0000000000002 84
ENST00000438665 MYO1C-010 protein_coding Homo_sapiens 1e-28 134
ENST00000463516 MYO1G-004 retained_intron Homo_sapiens 0 202
ENST00000464434 MYO1G-002 nonsense_mediated_decay Homo_sapiens 0 1024
ENST00000480503 MYO1G-005 retained_intron Homo_sapiens 0 824
ENST00000483585 MYO1G-003 retained_intron Homo_sapiens 0 824
ENST00000488554 MYO1G-006 retained_intron Homo_sapiens 0 202
ENST00000495831 MYO1G-007 nonsense_mediated_decay Homo_sapiens 0 680
ENST00000545534 MYO1C-003 protein_coding Homo_sapiens 8e-29 134
ENST00000575158 MYO1C-002 protein_coding Homo_sapiens 1e-28 134
ENST00000594824 MYO9B-002 protein_coding Homo_sapiens 0.0000000000002 84
ENST00000595618 MYO9B-001 protein_coding Homo_sapiens 0.0000000000002 84
ENST00000595641 MYO9B-003 protein_coding Homo_sapiens 0.0000000000001 84

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