C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAP30 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146209 Sap30bp-003 ENSMUSG00000020755 10090 + 11:115933573-115957439 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IO CIL_0007IO_0002 CGP 11:115892595-115933477
CIL_0002K8 CIL_0002K8_0003 CGP 11:115933282-116008412

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000542343 SAP30BP-003 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000577292 SAP30BP-019 retained_intron Homo_sapiens 0 250
ENST00000578288 SAP30BP-007 retained_intron Homo_sapiens 9e-18 95
ENST00000578354 SAP30BP-016 processed_transcript Homo_sapiens 6e-18 95
ENST00000578909 SAP30BP-017 protein_coding Homo_sapiens 0 250
ENST00000579864 SAP30BP-018 processed_transcript Homo_sapiens 0 250
ENST00000579877 SAP30BP-013 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000580322 SAP30BP-008 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000580484 SAP30BP-024 retained_intron Homo_sapiens 0 250
ENST00000582022 SAP30BP-006 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000583170 SAP30BP-011 nonsense_mediated_decay Homo_sapiens 6e-18 95
ENST00000583536 SAP30BP-015 protein_coding Homo_sapiens 1e-17 95
ENST00000583737 SAP30BP-014 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000584667 SAP30BP-001 protein_coding Homo_sapiens 0 250
ENST00000584861 SAP30BP-012 retained_intron Homo_sapiens 2e-17 94

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