C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase D2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020828 Pld2 10090 + 11:70540064-70558110 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018429 Pld2-001 70540306-70558110 protein_coding
  ENSMUST00000108556 Pld2-002 70540356-70546398 protein_coding
  ENSMUST00000108557 Pld2-006 70540343-70558110 protein_coding
  ENSMUST00000130678 Pld2-003 70555638-70557227 protein_coding
  ENSMUST00000146248 Pld2-004 70555803-70557477 retained_intron
  ENSMUST00000157075 Pld2-005 70540064-70541183 protein_coding
  ENSMUST00000179806 Pld2-007 70553960-70557103 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018429ENSMUST00000108556ENSMUST00000108557ENSMUST00000179806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018429 11.267±1.63 3.849±0.68 11.547±1.50 3.878±1.44 8.869±2.53 2.959±0.40 2.897±0.60 3.780±0.45 1.752±0.37 11.174±1.25 1.532±0.43 8.276±2.44 5.556±2.42 0.198±0.06
ENSMUST00000108556 N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.07 N/A 0.768±0.00 0.984±0.42 N/A 0.076±0.06
ENSMUST00000108557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 N/A 0.091±0.07
ENSMUST00000179806 N/A N/A N/A 6.834±0.00 N/A N/A N/A N/A N/A N/A N/A 5.834±0.00 7.473±2.41 0.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RF CIL_0001RF_0002 CGP 11:70525367-70558110
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002031 IDA G-protein coupled receptor internalization
GO:0004630 IDA phospholipase D activity
GO:0005515 IEA protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006898 IDA receptor-mediated endocytosis
GO:0016042 IEA lipid catabolic process
GO:0031526 IDA brush border membrane
GO:0035091 IEA phosphatidylinositol binding
GO:0070290 IEA N-acylphosphatidylethanolamine-specific phospholipase D activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034262 pld2 phospholipase D2 protein_coding Danio_rerio
ENSG00000129219 PLD2 phospholipase D2 protein_coding Homo_sapiens

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