C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase D2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018429 Pld2-001 ENSMUSG00000020828 10090 + 11:70540306-70558110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018429 11.267±1.63 3.849±0.68 11.547±1.50 3.878±1.44 8.869±2.53 2.959±0.40 2.897±0.60 3.780±0.45 1.752±0.37 11.174±1.25 1.532±0.43 8.276±2.44 5.556±2.42 0.198±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RF CIL_0001RF_0002 CGP 11:70525367-70558110
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002031 IDA G-protein coupled receptor internalization
GO:0004630 IDA phospholipase D activity
GO:0005515 IEA protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006898 IDA receptor-mediated endocytosis
GO:0016042 IEA lipid catabolic process
GO:0031526 IDA brush border membrane
GO:0035091 IEA phosphatidylinositol binding
GO:0070290 IEA N-acylphosphatidylethanolamine-specific phospholipase D activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263088 PLD2-001 protein_coding Homo_sapiens 0 3302
ENST00000571273 PLD2-010 retained_intron Homo_sapiens 0 473
ENST00000572127 PLD2-011 retained_intron Homo_sapiens 5e-34 148
ENST00000572199 PLD2-009 retained_intron Homo_sapiens 0 217
ENST00000572940 PLD2-015 protein_coding Homo_sapiens 0 2800
ENST00000573258 PLD2-008 retained_intron Homo_sapiens 0 276
ENST00000574268 PLD2-003 retained_intron Homo_sapiens 0 204
ENST00000574796 PLD2-006 retained_intron Homo_sapiens 0 521
ENST00000575246 PLD2-002 nonsense_mediated_decay Homo_sapiens 0 1746
ENST00000575316 PLD2-004 protein_coding Homo_sapiens 0 553
ENST00000575813 PLD2-005 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000575945 PLD2-014 retained_intron Homo_sapiens 0 309
ENST00000576329 PLD2-007 retained_intron Homo_sapiens 0 196
ENST00000576864 PLD2-013 protein_coding Homo_sapiens 0 649
ENST00000576983 PLD2-012 protein_coding Homo_sapiens 0 593

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