C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142507-ENSG00000129219 CGP 9606 17:4796144-4823434
GeneTranscriptPositionBiotype
ENSG00000129219 (PLD2)
phospholipase D2 		ENST00000263088 (PLD2-001) 4807096-4823434 protein_coding
ENST00000571273 (PLD2-010) 4817944-4819213 retained_intron
ENST00000572127 (PLD2-011) 4818198-4819465 retained_intron
ENST00000572199 (PLD2-009) 4816708-4817375 retained_intron
ENST00000572940 (PLD2-015) 4807169-4823428 protein_coding
ENST00000573258 (PLD2-008) 4815903-4817137 retained_intron
ENST00000574268 (PLD2-003) 4807192-4809118 retained_intron
ENST00000574796 (PLD2-006) 4814150-4815869 retained_intron
ENST00000575246 (PLD2-002) 4807183-4818385 nonsense_mediated_decay
ENST00000575316 (PLD2-004) 4807562-4809325 protein_coding
ENST00000575813 (PLD2-005) 4810807-4815554 nonsense_mediated_decay
ENST00000575945 (PLD2-014) 4821640-4822795 retained_intron
ENST00000576329 (PLD2-007) 4815859-4816905 retained_intron
ENST00000576864 (PLD2-013) 4818593-4823434 protein_coding
ENST00000576983 (PLD2-012) 4817146-4819515 protein_coding
ENSG00000142507 (PSMB6)
proteasome (prosome, macropain) subunit, beta type, 6 		ENST00000270586 (PSMB6-001) 4796144-4798503 protein_coding
ENST00000571309 (PSMB6-003) 4796204-4798329 nonsense_mediated_decay
ENST00000575079 (PSMB6-002) 4796161-4797174 retained_intron
ENST00000575643 (PSMB6-004) 4797684-4798475 retained_intron
ENST00000614486 (PSMB6-201) 4796144-4798502 protein_coding
ENSG00000262165 (RP11-81A22.5)
 ENST00000571067 (RP11-81A22.5-001) 4801159-4807013 lincRNA
CIL_0001RF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018286-ENSMUSG00000020828 CGP 10090 11:70525367-70558110
GeneTranscriptPositionBiotype
ENSMUSG00000018286 (Psmb6)
proteasome (prosome, macropain) subunit, beta type 6 		ENSMUST00000018430 (Psmb6-001) 70525386-70527649 protein_coding
ENSMUST00000128870 (Psmb6-002) 70527072-70527858 retained_intron
ENSMUST00000145503 (Psmb6-004) 70525367-70526424 retained_intron
ENSMUST00000148535 (Psmb6-003) 70526110-70527193 retained_intron
ENSMUSG00000020828 (Pld2)
phospholipase D2 		ENSMUST00000018429 (Pld2-001) 70540306-70558110 protein_coding
ENSMUST00000108556 (Pld2-002) 70540356-70546398 protein_coding
ENSMUST00000108557 (Pld2-006) 70540343-70558110 protein_coding
ENSMUST00000130678 (Pld2-003) 70555638-70557227 protein_coding
ENSMUST00000146248 (Pld2-004) 70555803-70557477 retained_intron
ENSMUST00000157075 (Pld2-005) 70540064-70541183 protein_coding
ENSMUST00000179806 (Pld2-007) 70553960-70557103 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RF_0001ENSG00000129219ENST00000263088ENST00000571273ENST00000572127ENST00000572199ENST00000572940ENST00000573258ENST00000574268ENST00000574796ENST00000575246ENST00000575316ENST00000575813ENST00000575945ENST00000576329ENST00000576864ENST00000576983ENSG00000142507ENST00000270586ENST00000571309ENST00000575079ENST00000575643ENST00000614486ENSG00000262165ENST00000571067CIL_0001RF_0002ENSMUSG00000018286ENSMUST00000018430ENSMUST00000128870ENSMUST00000145503ENSMUST00000148535ENSMUSG00000020828ENSMUST00000018429ENSMUST00000108556ENSMUST00000108557ENSMUST00000130678ENSMUST00000146248ENSMUST00000157075ENSMUST00000179806
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RF_0001ENSG00000129219ENST00000263088ENST00000572940ENST00000574796ENST00000575246ENST00000575316ENST00000575813ENST00000576864ENST00000576983ENSG00000142507ENST00000270586ENST00000571309ENSG00000262165ENST00000571067CIL_0001RF_0002ENSMUSG00000018286ENSMUST00000018430ENSMUST00000128870ENSMUST00000148535ENSMUSG00000020828ENSMUST00000018429ENSMUST00000108556ENSMUST00000108557ENSMUST00000179806
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129219 ENST00000263088 2.531±0.00 3.661±0.00 N/A 0.454±0.00 3.955±3.07 0.140±0.00 0.655±0.34 1.482±0.00 N/A 5.995±0.00 N/A 7.130±4.94 5.885±2.93 1.470±0.00
ENST00000571273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572940 6.590±0.00 8.502±0.00 0.558±0.00 2.822±2.51 N/A 2.689±0.00 0.566±0.00 1.265±0.99 0.350±0.00 N/A 0.983±0.00 7.004±2.59 4.710±1.46 2.257±1.64
ENST00000573258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574796 N/A N/A N/A N/A N/A N/A 1.256±0.00 N/A 2.531±0.00 N/A N/A N/A N/A N/A
ENST00000575246 N/A N/A N/A 2.796±0.00 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A
ENST00000575316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.012±0.00 N/A N/A N/A N/A
ENST00000575813 N/A N/A 1.879±0.00 N/A N/A N/A N/A 3.804±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576864 N/A N/A 0.788±0.00 N/A N/A 2.796±0.00 N/A N/A N/A N/A N/A 24.456±0.00 15.795±0.00 5.185±1.51
ENST00000576983 N/A N/A N/A 1.723±0.00 N/A 3.000±0.00 N/A N/A N/A N/A N/A 28.430±0.00 26.063±0.00 5.057±1.22
ENSG00000142507 ENST00000270586 62.999±0.00 84.317±0.00 8.793±0.00 28.608±8.92 44.484±34.34 32.854±23.66 39.803±28.12 42.396±30.51 47.690±38.38 35.254±29.85 77.282±47.19 56.739±33.63 141.595±45.38 45.817±11.41
ENST00000571309 11.116±0.00 20.719±0.00 N/A 19.361±0.00 N/A 18.776±0.00 17.074±0.00 38.710±0.00 32.340±0.00 18.762±0.00 25.361±0.00 N/A N/A 19.814±0.00
ENST00000575079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262165 ENST00000571067 0.547±0.00 0.438±0.00 N/A 0.724±0.11 0.586±0.00 0.449±0.00 0.142±0.00 0.723±0.00 0.337±0.00 1.464±0.00 0.194±0.00 0.900±0.39 0.570±0.00 0.520±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018286 ENSMUST00000018430 160.612±19.70 141.368±11.90 133.868±21.23 142.261±74.96 136.945±26.65 118.267±15.48 127.361±7.63 166.948±7.61 161.941±30.75 121.395±5.34 149.330±6.54 190.279±43.97 134.720±60.72 157.036±62.55
ENSMUST00000128870 N/A N/A N/A 23.739±0.00 N/A N/A N/A N/A N/A N/A N/A 30.951±0.00 32.814±20.45 13.733±0.00
ENSMUST00000145503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148535 N/A N/A N/A N/A 17.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020828 ENSMUST00000018429 11.267±1.63 3.849±0.68 11.547±1.50 3.878±1.44 8.869±2.53 2.959±0.40 2.897±0.60 3.780±0.45 1.752±0.37 11.174±1.25 1.532±0.43 8.276±2.44 5.556±2.42 0.198±0.06
ENSMUST00000108556 N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.07 N/A 0.768±0.00 0.984±0.42 N/A 0.076±0.06
ENSMUST00000108557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 N/A 0.091±0.07
ENSMUST00000130678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179806 N/A N/A N/A 6.834±0.00 N/A N/A N/A N/A N/A N/A N/A 5.834±0.00 7.473±2.41 0.262±0.00

Loading