C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GTPase activating protein, alpha subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021027 Ralgapa1 10090 - 12:55602929-55821167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000085385 Ralgapa1-201 55602929-55821167 protein_coding
  ENSMUST00000110687 Ralgapa1-202 55602929-55821167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085385ENSMUST00000110687
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085385 4.656±0.63 3.184±0.33 3.707±0.49 4.730±0.00 3.381±0.70 1.568±0.69 1.769±0.31 2.040±0.70 1.301±1.08 1.541±0.38 1.373±0.75 4.814±1.94 2.159±0.91 4.211±0.96
ENSMUST00000110687 N/A N/A N/A 5.699±0.00 N/A 0.573±0.00 N/A 0.716±0.13 N/A N/A N/A N/A 0.493±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MF CIL_0008MF_0002 VISTA 12:55314270-55915258
CIL_0008ME CIL_0008ME_0002 VISTA 12:55343542-55944223
CIL_0007LS CIL_0007LS_0003 UCNEbase 12:55566857-57467023
CIL_00045O CIL_00045O_0002 CGP 12:55598917-55821167
CIL_00045N CIL_00045N_0002 CGP 12:55602929-55869735

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0017123 ISS Ral GTPase activator activity
GO:0032859 ISS activation of Ral GTPase activity
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076889 ralgapa1 Ral GTPase activating protein, alpha subunit 1 (catalytic) protein_coding Danio_rerio
ENSG00000174373 RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) protein_coding Homo_sapiens

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