C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174373-ENSG00000100916 CGP 9606 14:35538352-35932325
GeneTranscriptPositionBiotype
ENSG00000100916 (BRMS1L)
breast cancer metastasis-suppressor 1-like 		ENST00000216807 (BRMS1L-001) 35826318-35871963 protein_coding
ENST00000547420 (BRMS1L-004) 35826446-35858681 nonsense_mediated_decay
ENST00000548758 (BRMS1L-003) 35826457-35866051 retained_intron
ENST00000551774 (BRMS1L-006) 35833001-35932325 protein_coding
ENST00000552677 (BRMS1L-002) 35826441-35870860 nonsense_mediated_decay
ENST00000552849 (BRMS1L-005) 35867777-35870393 retained_intron
ENSG00000174373 (RALGAPA1)
Ral GTPase activating protein, alpha subunit 1 (catalytic) 		ENST00000307138 (RALGAPA1-001) 35538352-35809304 protein_coding
ENST00000382366 (RALGAPA1-003) 35539635-35808934 protein_coding
ENST00000389698 (RALGAPA1-002) 35538352-35809226 protein_coding
ENST00000553892 (RALGAPA1-007) 35548533-35808835 protein_coding
ENST00000553917 (RALGAPA1-012) 35689534-35723117 retained_intron
ENST00000554259 (RALGAPA1-019) 35538357-35651876 protein_coding
ENST00000554355 (RALGAPA1-015) 35549174-35572860 retained_intron
ENST00000554573 (RALGAPA1-006) 35538352-35627276 protein_coding
ENST00000554652 (RALGAPA1-005) 35676229-35760894 retained_intron
ENST00000554704 (RALGAPA1-018) 35706634-35760857 processed_transcript
ENST00000555828 (RALGAPA1-008) 35748792-35756884 processed_transcript
ENST00000556106 (RALGAPA1-017) 35539160-35542524 processed_transcript
ENST00000556192 (RALGAPA1-021) 35807805-35809116 processed_transcript
ENST00000556837 (RALGAPA1-016) 35564373-35572680 processed_transcript
ENST00000556839 (RALGAPA1-011) 35686542-35723876 retained_intron
ENST00000557069 (RALGAPA1-010) 35728341-35742526 retained_intron
ENST00000557104 (RALGAPA1-009) 35748400-35750529 retained_intron
ENST00000557638 (RALGAPA1-013) 35683446-35684974 retained_intron
ENSG00000253059 (SNORA31)
Small nucleolar RNA SNORA31 		ENST00000517250 (SNORA31.1-226) 35756327-35756463 snoRNA
ENSG00000257272 (RP11-317N8.3)
 ENST00000553046 (RP11-317N8.3-001) 35873857-35875303 lincRNA
ENSG00000257307 (RP11-317N8.4)
 ENST00000550416 (RP11-317N8.4-001) 35881001-35881709 processed_pseudogene
ENSG00000257957 (QRSL1P3)
glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 pseudogene 3 		ENST00000552666 (QRSL1P3-001) 35765795-35767110 processed_pseudogene
ENSG00000258342 (RP11-116N8.1)
 ENST00000550089 (RP11-116N8.1-001) 35897982-36063743 sense_overlapping
ENSG00000258938 (RP11-317N8.5)
 ENST00000555918 (RP11-317N8.5-001) 35819224-35826765 antisense
CIL_00045N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021027-ENSMUSG00000012076 CGP 10090 12:55602929-55869735
GeneTranscriptPositionBiotype
ENSMUSG00000012076 (Brms1l)
breast cancer metastasis-suppressor 1-like 		ENSMUST00000059250 (Brms1l-201) 55836366-55869735 protein_coding
ENSMUSG00000021027 (Ralgapa1)
Ral GTPase activating protein, alpha subunit 1 		ENSMUST00000085385 (Ralgapa1-201) 55602929-55821167 protein_coding
ENSMUST00000110687 (Ralgapa1-202) 55602929-55821167 protein_coding
ENSMUSG00000046747 (Gm9812)
predicted gene 9812 		ENSMUST00000061934 (Gm9812-201) 55820611-55821580 pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045N_0001ENSG00000100916ENST00000216807ENST00000547420ENST00000548758ENST00000551774ENST00000552677ENST00000552849ENSG00000174373ENST00000307138ENST00000382366ENST00000389698ENST00000553892ENST00000553917ENST00000554259ENST00000554355ENST00000554573ENST00000554652ENST00000554704ENST00000555828ENST00000556106ENST00000556192ENST00000556837ENST00000556839ENST00000557069ENST00000557104ENST00000557638ENSG00000253059ENST00000517250ENSG00000257272ENST00000553046ENSG00000257307ENST00000550416ENSG00000257957ENST00000552666ENSG00000258342ENST00000550089ENSG00000258938ENST00000555918CIL_00045N_0002ENSMUSG00000012076ENSMUST00000059250ENSMUSG00000021027ENSMUST00000085385ENSMUST00000110687ENSMUSG00000046747ENSMUST00000061934
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045N_0001ENSG00000100916ENST00000216807ENST00000548758ENST00000551774ENST00000552677ENSG00000174373ENST00000307138ENST00000382366ENST00000389698ENST00000553892ENST00000554259ENST00000554573ENST00000554652ENSG00000253059ENST00000517250ENSG00000257272ENST00000553046ENSG00000257307ENST00000550416ENSG00000257957ENST00000552666ENSG00000258342ENST00000550089ENSG00000258938ENST00000555918CIL_00045N_0002ENSMUSG00000012076ENSMUST00000059250ENSMUSG00000021027ENSMUST00000085385ENSMUST00000110687ENSMUSG00000046747ENSMUST00000061934
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100916 ENST00000216807 1.501±0.00 2.693±0.00 0.856±0.00 4.849±1.27 2.326±0.00 1.736±1.04 2.604±2.03 2.247±1.55 1.446±0.34 1.021±0.66 1.309±1.22 2.842±0.57 2.157±0.54 3.332±1.83
ENST00000547420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548758 N/A N/A 0.448±0.00 N/A N/A 0.636±0.00 N/A N/A 1.091±0.00 0.576±0.00 0.656±0.00 N/A N/A 1.994±0.00
ENST00000551774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.416±0.00 4.668±0.00
ENST00000552677 N/A N/A N/A N/A 0.519±0.00 N/A 0.361±0.00 N/A N/A N/A N/A 1.760±0.00 N/A 1.598±0.00
ENST00000552849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174373 ENST00000307138 N/A 0.407±0.00 N/A N/A N/A 3.599±0.00 N/A 0.261±0.00 N/A N/A N/A N/A 0.496±0.00 0.938±0.00
ENST00000382366 0.325±0.00 N/A 1.118±0.00 N/A 0.259±0.00 3.034±0.00 N/A 0.423±0.06 2.093±0.00 N/A 2.267±0.00 2.718±0.00 N/A N/A
ENST00000389698 0.551±0.00 N/A 1.134±0.00 2.669±0.00 N/A 0.402±0.00 N/A N/A N/A 1.714±0.79 N/A 1.324±0.54 0.358±0.03 1.713±0.50
ENST00000553892 N/A N/A 1.566±0.00 4.108±0.00 3.695±0.00 4.080±0.00 1.638±0.00 N/A N/A 5.443±0.00 N/A N/A N/A N/A
ENST00000553917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.392±0.00 1.420±0.21 0.288±0.00 1.111±0.00
ENST00000554355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554573 1.590±0.00 1.494±0.00 N/A 2.355±0.00 0.734±0.00 1.680±0.00 1.274±0.00 3.083±0.00 0.452±0.00 2.501±0.00 0.913±0.00 1.933±0.25 0.646±0.25 1.895±0.00
ENST00000554652 N/A N/A 1.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253059 ENST00000517250 N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257272 ENST00000553046 0.051±0.00 0.048±0.00 N/A 0.278±0.01 N/A 0.082±0.01 0.061±0.00 N/A 0.321±0.28 0.531±0.00 N/A 0.105±0.00 0.113±0.00 0.057±0.00
ENSG00000257307 ENST00000550416 0.049±0.00 0.053±0.00 N/A 0.366±0.34 0.072±0.02 N/A 0.104±0.00 N/A 0.023±0.00 0.123±0.00 0.072±0.03 0.034±0.00 N/A 0.096±0.00
ENSG00000257957 ENST00000552666 N/A N/A 0.893±0.00 0.030±0.00 0.184±0.05 0.595±0.00 0.066±0.01 N/A 0.030±0.00 N/A N/A 0.104±0.09 N/A N/A
ENSG00000258342 ENST00000550089 N/A N/A N/A 3.809±2.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258938 ENST00000555918 N/A N/A 0.524±0.00 N/A N/A 1.273±0.00 N/A 0.284±0.00 N/A 0.534±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012076 ENSMUST00000059250 9.732±2.33 8.471±0.81 14.382±1.72 21.292±3.60 8.073±2.00 3.602±1.35 7.577±0.58 6.597±1.29 5.521±4.56 11.159±2.22 4.569±0.98 12.703±3.97 17.644±3.34 6.931±1.64
ENSMUSG00000021027 ENSMUST00000085385 4.656±0.63 3.184±0.33 3.707±0.49 4.730±0.00 3.381±0.70 1.568±0.69 1.769±0.31 2.040±0.70 1.301±1.08 1.541±0.38 1.373±0.75 4.814±1.94 2.159±0.91 4.211±0.96
ENSMUST00000110687 N/A N/A N/A 5.699±0.00 N/A 0.573±0.00 N/A 0.716±0.13 N/A N/A N/A N/A 0.493±0.00 N/A
ENSMUSG00000046747 ENSMUST00000061934 N/A 4.092±1.02 N/A N/A 2.529±0.71 3.818±0.42 N/A N/A N/A 3.051±0.00 N/A 6.370±1.17 N/A 7.057±0.00

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