C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuro-oncological ventral antigen 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021047 Nova1 10090 - 12:46694517-46818775 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021438 Nova1-201 46694517-46818775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021438 3.697±1.40 1.404±0.41 0.278±0.04 26.979±16.02 3.565±1.82 0.704±0.18 0.628±0.06 0.228±0.08 0.090±0.04 1.695±0.29 0.361±0.09 1.915±0.93 0.081±0.10 0.374±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EO CIL_0005EO_0002 CGP 12:44852488-46818775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IDA mRNA splicing, via spliceosome
GO:0003729 IDA mRNA binding
GO:0005634 IC nucleus
GO:0005730 IEA nucleolus
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding
GO:0051252 IGI regulation of RNA metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017673 nova2 neuro-oncological ventral antigen 2 protein_coding Danio_rerio
ENSDARG00000020178 nova1 neuro-oncological ventral antigen 1 protein_coding Danio_rerio
ENSG00000139910 NOVA1 neuro-oncological ventral antigen 1 protein_coding Homo_sapiens

Loading