C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: metastasis associated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021144 Mta1 10090 + 12:113098278-113137206 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009099 Mta1-001 113098278-113137206 protein_coding
  ENSMUST00000069690 Mta1-003 113098323-113137173 protein_coding
  ENSMUST00000109723 Mta1-002 113098278-113137206 protein_coding
  ENSMUST00000109726 Mta1-201 113098278-113137206 protein_coding
  ENSMUST00000109727 Mta1-202 113098278-113137205 protein_coding
  ENSMUST00000130926 Mta1-004 113098401-113136669 processed_transcript
  ENSMUST00000134488 Mta1-006 113131332-113133380 processed_transcript
  ENSMUST00000156030 Mta1-005 113131548-113133338 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009099ENSMUST00000069690ENSMUST00000109726ENSMUST00000109727ENSMUST00000130926
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009099 N/A N/A N/A N/A N/A N/A 3.494±0.58 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000069690 9.119±4.34 49.381±4.31 N/A N/A 16.764±8.09 11.152±1.54 3.834±0.06 6.043±2.64 6.836±1.59 11.163±4.19 N/A 33.643±6.37 N/A 5.125±0.04
ENSMUST00000109726 18.032±1.38 10.608±0.00 18.413±1.71 16.652±8.70 9.819±4.21 4.836±1.66 9.794±2.34 3.442±0.52 13.482±6.12 12.229±3.96 4.287±1.09 23.154±10.52 9.112±1.61 N/A
ENSMUST00000109727 N/A N/A N/A 16.762±6.63 N/A N/A 1.575±0.00 6.079±0.88 2.720±1.12 N/A N/A 9.888±2.27 3.708±0.92 22.101±9.25
ENSMUST00000130926 5.204±1.00 N/A 5.047±1.14 N/A 6.628±4.20 5.028±0.47 2.037±0.00 2.938±0.00 2.549±0.78 6.046±0.77 2.080±0.00 15.304±6.06 5.486±0.68 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H9 CIL_0006H9_0002 CGP 12:113074502-113137206
CIL_0006HA CIL_0006HA_0002 CGP 12:113098278-113145504

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0001047 IDA core promoter binding
GO:0001103 IEA RNA polymerase II repressing transcription factor binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IMP transcription coactivator activity
GO:0003714 IMP transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 ISS nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005874 ISS microtubule
GO:0006302 IMP double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010212 IDA response to ionizing radiation
GO:0016581 IPI NuRD complex
GO:0032496 IDA response to lipopolysaccharide
GO:0032922 IMP circadian regulation of gene expression
GO:0040029 ISS regulation of gene expression, epigenetic
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding
GO:0045475 IMP locomotor rhythm
GO:0050727 IMP regulation of inflammatory response
GO:1902499 ISS positive regulation of protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007198 MTA1 metastasis associated 1 protein_coding Danio_rerio
ENSG00000182979 MTA1 metastasis associated 1 protein_coding Homo_sapiens

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