C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009099 Mta1-001 ENSMUSG00000021144 10090 + 12:113098278-113137206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSMUST00000009099
Transcript ID Heart
ENSMUST00000009099 3.494±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H9 CIL_0006H9_0002 CGP 12:113074502-113137206
CIL_0006HA CIL_0006HA_0002 CGP 12:113098278-113145504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0001047 IDA core promoter binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IMP transcription coactivator activity
GO:0003714 IMP transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 ISS nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005874 ISS microtubule
GO:0006302 IMP double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010212 IDA response to ionizing radiation
GO:0016581 IPI NuRD complex
GO:0032496 IDA response to lipopolysaccharide
GO:0032922 IMP circadian regulation of gene expression
GO:0040029 ISS regulation of gene expression, epigenetic
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045475 IMP locomotor rhythm
GO:0050727 IMP regulation of inflammatory response
GO:1902499 ISS positive regulation of protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 0 2861
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 2436
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 0 2338
ENST00000424723 MTA1-006 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000426567 MTA1-012 protein_coding Homo_sapiens 0 444
ENST00000434050 MTA1-007 protein_coding Homo_sapiens 0 1967
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 0 2806
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 0 1524
ENST00000469140 MTA1-021 retained_intron Homo_sapiens 0 928
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 784
ENST00000481206 MTA1-015 retained_intron Homo_sapiens 0 459
ENST00000481635 MTA1-014 retained_intron Homo_sapiens 0 412
ENST00000490198 MTA1-010 retained_intron Homo_sapiens 0 431
ENST00000494026 MTA1-016 retained_intron Homo_sapiens 0 449
ENST00000494981 MTA1-013 protein_coding Homo_sapiens 0 460
ENST00000498644 MTA1-017 protein_coding Homo_sapiens 0 913
ENST00000548638 TEX22-001 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000550551 MTA1-022 protein_coding Homo_sapiens 0 514
ENST00000550808 MTA1-020 retained_intron Homo_sapiens 0 481
ENST00000551236 MTA1-018 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000552286 MTA1-011 retained_intron Homo_sapiens 0 682

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