C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109726 Mta1-201 ENSMUSG00000021144 10090 + 12:113098278-113137206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000109726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000109726 18.032±1.38 10.608±0.00 18.413±1.71 16.652±8.70 9.819±4.21 4.836±1.66 9.794±2.34 3.442±0.52 13.482±6.12 12.229±3.96 4.287±1.09 23.154±10.52 9.112±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H9 CIL_0006H9_0002 CGP 12:113074502-113137206
CIL_0006HA CIL_0006HA_0002 CGP 12:113098278-113145504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001047 IEA core promoter binding
GO:0001103 IEA RNA polymerase II repressing transcription factor binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IEA transcription coactivator activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 IEA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005874 IEA microtubule
GO:0006302 IEA double-strand break repair
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010212 IEA response to ionizing radiation
GO:0016581 IPI NuRD complex
GO:0040029 IEA regulation of gene expression, epigenetic
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding
GO:1902499 IEA positive regulation of protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 0 2438
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 2728
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 0 1914
ENST00000424723 MTA1-006 nonsense_mediated_decay Homo_sapiens 0 636
ENST00000426567 MTA1-012 protein_coding Homo_sapiens 0 444
ENST00000434050 MTA1-007 protein_coding Homo_sapiens 0 1967
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 0 2383
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 0 1186
ENST00000469140 MTA1-021 retained_intron Homo_sapiens 0 928
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 784
ENST00000481206 MTA1-015 retained_intron Homo_sapiens 0 459
ENST00000481635 MTA1-014 retained_intron Homo_sapiens 0 412
ENST00000490198 MTA1-010 retained_intron Homo_sapiens 0 431
ENST00000494026 MTA1-016 retained_intron Homo_sapiens 0 372
ENST00000494981 MTA1-013 protein_coding Homo_sapiens 0 460
ENST00000498644 MTA1-017 protein_coding Homo_sapiens 0 835
ENST00000548638 TEX22-001 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000550551 MTA1-022 protein_coding Homo_sapiens 0 514
ENST00000550808 MTA1-020 retained_intron Homo_sapiens 0 481
ENST00000551236 MTA1-018 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000552286 MTA1-011 retained_intron Homo_sapiens 0 682

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