C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109723 Mta1-002 ENSMUSG00000021144 10090 + 12:113098278-113137206 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H9 CIL_0006H9_0002 CGP 12:113074502-113137206
CIL_0006HA CIL_0006HA_0002 CGP 12:113098278-113145504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016581 IPI NuRD complex
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 0 2338
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 1914
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 0 2795
ENST00000424723 MTA1-006 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000426567 MTA1-012 protein_coding Homo_sapiens 0 442
ENST00000434050 MTA1-007 protein_coding Homo_sapiens 0 1500
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 0 2338
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 0 1524
ENST00000469140 MTA1-021 retained_intron Homo_sapiens 0 859
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 784
ENST00000481206 MTA1-015 retained_intron Homo_sapiens 0 459
ENST00000481635 MTA1-014 retained_intron Homo_sapiens 0 412
ENST00000490198 MTA1-010 retained_intron Homo_sapiens 0 431
ENST00000494026 MTA1-016 retained_intron Homo_sapiens 0 449
ENST00000494981 MTA1-013 protein_coding Homo_sapiens 0 460
ENST00000498644 MTA1-017 protein_coding Homo_sapiens 0 913
ENST00000548638 TEX22-001 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000550551 MTA1-022 protein_coding Homo_sapiens 0 514
ENST00000550808 MTA1-020 retained_intron Homo_sapiens 0 481
ENST00000551236 MTA1-018 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000552286 MTA1-011 retained_intron Homo_sapiens 0 460

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