C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protease (prosome, macropain) 26S subunit, ATPase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021178 Psmc1 10090 + 12:100110186-100123364 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021595 Psmc1-201 100110186-100123364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021595 25.383±2.19 24.035±2.85 25.629±2.63 54.912±35.08 20.604±6.81 18.707±2.31 25.045±1.54 31.042±1.43 41.146±11.76 21.243±1.40 57.819±2.62 38.323±29.70 82.516±50.79 28.748±13.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L5 CIL_0002L5_0003 CGP 12:99964499-100123364
CIL_0001JW CIL_0001JW_0002 CGP 12:100110186-100159653

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005838 IDA proteasome regulatory particle
GO:0016020 IEA membrane
GO:0016787 IEA hydrolase activity
GO:0017025 IEA TBP-class protein binding
GO:0022624 IDA proteasome accessory complex
GO:0030163 IEA protein catabolic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030537 psmc1a proteasome (prosome, macropain) 26S subunit, ATPase, 1a protein_coding Danio_rerio
ENSDARG00000043561 psmc1b proteasome (prosome, macropain) 26S subunit, ATPase, 1b protein_coding Danio_rerio
ENSG00000100764 PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 protein_coding Homo_sapiens

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