C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002L5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043557-ENSDARG00000043561 CGP 7955 20:16743514-16781421
GeneTranscriptPositionBiotype
ENSDARG00000043557 (kcnk13b)
potassium channel, subfamily K, member 13b 		ENSDART00000005244 (kcnk13b-001) 16743514-16749602 protein_coding
ENSDARG00000043561 (psmc1b)
proteasome (prosome, macropain) 26S subunit, ATPase, 1b 		ENSDART00000063950 (psmc1b-001) 16762397-16781421 protein_coding
ENSDARG00000096400 (si:ch211-173b9.5)
si:ch211-173b9.5 		ENSDART00000151052 (si:ch211-173b9.5-001) 16760233-16761740 lincRNA
CIL_0002L5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152315-ENSG00000100764 CGP 9606 14:90061765-90275429
GeneTranscriptPositionBiotype
ENSG00000119720 (NRDE2)
NRDE-2, necessary for RNA interference, domain containing 		ENST00000354366 (NRDE2-001) 90267856-90332137 protein_coding
ENST00000553409 (NRDE2-002) 90278060-90331910 nonsense_mediated_decay
ENST00000554464 (NRDE2-007) 90290575-90302837 protein_coding
ENST00000555903 (NRDE2-004) 90278558-90288885 retained_intron
ENST00000556189 (NRDE2-003) 90278054-90312516 nonsense_mediated_decay
ENST00000557064 (NRDE2-006) 90303954-90304654 processed_transcript
ENST00000557106 (NRDE2-005) 90316587-90331969 processed_transcript
ENST00000557732 (NRDE2-008) 90278061-90279283 retained_intron
ENST00000612614 (NRDE2-009) 90278058-90281595 retained_intron
ENSG00000152315 (KCNK13)
potassium channel, subfamily K, member 13 		ENST00000282146 (KCNK13-001) 90061765-90185857 protein_coding
ENSG00000258544 (RP11-750I4.2)
 ENST00000555594 (RP11-750I4.2-001) 90107675-90107995 processed_pseudogene
CIL_0002L5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045404-ENSMUSG00000021178 CGP 10090 12:99964499-100123364
GeneTranscriptPositionBiotype
ENSMUSG00000021178 (Psmc1)
protease (prosome, macropain) 26S subunit, ATPase 1 		ENSMUST00000021595 (Psmc1-201) 100110186-100123364 protein_coding
ENSMUSG00000045404 (Kcnk13)
potassium channel, subfamily K, member 13 		ENSMUST00000049788 (Kcnk13-003) 99964525-100062674 protein_coding
ENSMUST00000160413 (Kcnk13-001) 99964499-100062682 protein_coding
ENSMUST00000162221 (Kcnk13-002) 99964505-99966280 protein_coding
ENSMUST00000177549 (Kcnk13-201) 99964499-100062682 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L5_0001ENSDARG00000043557ENSDART00000005244ENSDARG00000043561ENSDART00000063950ENSDARG00000096400ENSDART00000151052CIL_0002L5_0002ENSG00000119720ENST00000354366ENST00000553409ENST00000554464ENST00000555903ENST00000556189ENST00000557064ENST00000557106ENST00000557732ENST00000612614ENSG00000152315ENST00000282146ENSG00000258544ENST00000555594CIL_0002L5_0003ENSMUSG00000021178ENSMUST00000021595ENSMUSG00000045404ENSMUST00000049788ENSMUST00000160413ENSMUST00000162221ENSMUST00000177549
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L5_0001ENSDARG00000043557ENSDART00000005244ENSDARG00000043561ENSDART00000063950ENSDARG00000096400ENSDART00000151052CIL_0002L5_0002ENSG00000119720ENST00000354366ENST00000553409ENSG00000152315ENST00000282146ENSG00000258544ENST00000555594CIL_0002L5_0003ENSMUSG00000021178ENSMUST00000021595ENSMUSG00000045404ENSMUST00000049788ENSMUST00000160413ENSMUST00000162221ENSMUST00000177549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043557 ENSDART00000005244 N/A N/A N/A 0.882±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043561 ENSDART00000063950 N/A N/A N/A 18.405±14.11 N/A N/A 12.119±9.14 25.080±0.00 1.988±0.00 N/A 14.637±0.00 N/A N/A N/A
ENSDARG00000096400 ENSDART00000151052 N/A N/A N/A 0.359±0.04 N/A N/A 1.069±0.89 0.402±0.00 N/A N/A 0.469±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119720 ENST00000354366 1.151±0.00 2.531±0.00 0.625±0.00 1.210±0.79 1.332±0.22 1.224±0.44 0.743±0.47 1.074±0.61 0.953±0.20 0.774±0.04 0.319±0.00 0.959±0.43 1.553±0.22 2.229±0.00
ENST00000553409 N/A N/A N/A N/A N/A N/A 0.533±0.00 N/A 2.136±0.00 1.661±0.00 N/A 1.988±0.00 N/A N/A
ENST00000554464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152315 ENST00000282146 0.164±0.00 0.968±0.00 0.231±0.00 0.476±0.27 0.165±0.07 0.112±0.07 1.075±0.00 3.264±0.00 0.188±0.00 0.296±0.00 N/A 0.303±0.06 0.432±0.12 7.845±1.99
ENSG00000258544 ENST00000555594 N/A N/A N/A N/A 0.716±0.00 N/A 0.043±0.00 0.240±0.00 N/A N/A 0.042±0.00 N/A N/A 0.221±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021178 ENSMUST00000021595 25.383±2.19 24.035±2.85 25.629±2.63 54.912±35.08 20.604±6.81 18.707±2.31 25.045±1.54 31.042±1.43 41.146±11.76 21.243±1.40 57.819±2.62 38.323±29.70 82.516±50.79 28.748±13.71
ENSMUSG00000045404 ENSMUST00000049788 0.408±0.22 N/A 0.234±0.08 N/A 0.529±0.17 0.154±0.00 0.129±0.01 0.103±0.06 0.124±0.07 0.632±0.16 0.052±0.03 0.664±0.18 0.025±0.03 0.399±0.12
ENSMUST00000160413 0.206±0.00 0.246±0.00 N/A 0.105±0.05 0.517±0.00 N/A 0.173±0.00 N/A 0.077±0.04 0.633±0.12 0.022±0.01 0.535±0.36 0.011±0.01 0.331±0.19
ENSMUST00000162221 0.119±0.00 0.324±0.26 N/A N/A 0.504±0.01 0.104±0.01 N/A 0.063±0.02 N/A N/A 0.062±0.00 0.967±0.59 0.014±0.00 N/A
ENSMUST00000177549 N/A 0.186±0.14 0.224±0.00 1.302±0.00 0.864±0.00 0.277±0.08 0.200±0.00 0.039±0.00 0.115±0.05 0.298±0.00 0.018±0.01 0.906±0.00 0.011±0.01 0.304±0.09

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