C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 88C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021182 Ccdc88c 10090 - 12:100912700-101028983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068411 Ccdc88c-201 100912700-101028983 protein_coding
  ENSMUST00000085096 Ccdc88c-202 100912700-101028983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000068411ENSMUST00000085096
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000068411 2.067±0.00 0.518±0.18 3.956±0.77 3.893±2.75 6.410±0.60 0.885±0.20 1.321±0.00 0.560±0.68 4.815±0.60 2.459±0.87 0.607±0.07 4.636±1.89
ENSMUST00000085096 N/A 0.331±0.11 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.374±0.18 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UN CIL_0001UN_0002 CGP 12:100876682-101028983
CIL_0000AE CIL_0000AE_0002 CGP 12:100912700-101083702

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001932 IMP regulation of protein phosphorylation
GO:0005515 IPI protein binding
GO:0016055 IEA Wnt signaling pathway
GO:0030165 IPI PDZ domain binding
GO:0031648 IMP protein destabilization
GO:0043621 IPI protein self-association
GO:0051260 IPI protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053713 ccdc88c coiled-coil domain containing 88C protein_coding Danio_rerio
ENSG00000015133 CCDC88C coiled-coil domain containing 88C protein_coding Homo_sapiens

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