C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119714-ENSG00000015133 CGP 9606 14:91232532-91417844
GeneTranscriptPositionBiotype
ENSG00000015133 (CCDC88C)
coiled-coil domain containing 88C 		ENST00000331194 (CCDC88C-201) 91271325-91285690 protein_coding
ENST00000334448 (CCDC88C-006) 91273469-91283623 retained_intron
ENST00000389856 (CCDC88C-003) 91378641-91417346 protein_coding
ENST00000389857 (CCDC88C-001) 91271325-91417777 protein_coding
ENST00000553403 (CCDC88C-002) 91378659-91417844 protein_coding
ENST00000553437 (CCDC88C-009) 91342143-91408758 retained_intron
ENST00000554051 (CCDC88C-013) 91338054-91338856 retained_intron
ENST00000554165 (CCDC88C-007) 91384390-91417678 processed_transcript
ENST00000554872 (CCDC88C-004) 91338862-91416838 retained_intron
ENST00000555995 (CCDC88C-010) 91288732-91291071 retained_intron
ENST00000556726 (CCDC88C-005) 91271323-91289331 nonsense_mediated_decay
ENST00000556767 (CCDC88C-008) 91408130-91416775 retained_intron
ENST00000557455 (CCDC88C-011) 91278141-91279977 retained_intron
ENST00000557507 (CCDC88C-012) 91313943-91315870 retained_intron
ENSG00000119714 (GPR68)
G protein-coupled receptor 68 		ENST00000529102 (GPR68-002) 91234037-91244508 protein_coding
ENST00000529300 (GPR68-003) 91235118-91253880 processed_transcript
ENST00000531499 (GPR68-001) 91232532-91253925 protein_coding
ENST00000535815 (GPR68-201) 91232533-91244508 protein_coding
ENSG00000258875 (CTD-2547L24.3)
 ENST00000553725 (CTD-2547L24.3-002) 91242759-91250835 lincRNA
ENST00000554096 (CTD-2547L24.3-001) 91242935-91252211 antisense
ENSG00000260810 (CTD-2547L24.4)
 ENST00000563574 (CTD-2547L24.4-001) 91258299-91259003 lincRNA
ENSG00000265856 (AL133153.1)
 ENST00000581346 (AL133153.1-201) 91333713-91333823 miRNA
CIL_0001UN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047415-ENSMUSG00000021182 CGP 10090 12:100876682-101028983
GeneTranscriptPositionBiotype
ENSMUSG00000021182 (Ccdc88c)
coiled-coil domain containing 88C 		ENSMUST00000068411 (Ccdc88c-201) 100912700-101028983 protein_coding
ENSMUST00000085096 (Ccdc88c-202) 100912700-101028983 protein_coding
ENSMUSG00000021185 (9030617O03Rik)
RIKEN cDNA 9030617O03 gene 		ENSMUST00000069782 (9030617O03Rik-001) 100779057-100872610 protein_coding
ENSMUST00000110069 (9030617O03Rik-003) 100779095-100872354 protein_coding
ENSMUST00000110070 (9030617O03Rik-002) 100779086-100896981 protein_coding
ENSMUST00000110073 (9030617O03Rik-004) 100779078-100872354 protein_coding
ENSMUST00000124957 (9030617O03Rik-006) 100867189-100875399 protein_coding
ENSMUST00000133970 (9030617O03Rik-007) 100885880-100895488 processed_transcript
ENSMUST00000154603 (9030617O03Rik-005) 100779136-100841383 nonsense_mediated_decay
ENSMUST00000167322 (9030617O03Rik-201) 100786142-100872348 protein_coding
ENSMUSG00000047415 (Gpr68)
G protein-coupled receptor 68 		ENSMUST00000053668 (Gpr68-201) 100876685-100899524 protein_coding
ENSMUST00000110065 (Gpr68-002) 100876685-100908181 protein_coding
ENSMUST00000110066 (Gpr68-001) 100876682-100908198 protein_coding
ENSMUST00000124459 (Gpr68-003) 100887684-100908198 processed_transcript
ENSMUST00000128306 (Gpr68-004) 100887872-100899524 processed_transcript
ENSMUST00000135684 (Gpr68-005) 100879314-100899498 processed_transcript
ENSMUSG00000080575 (Mir1190)
microRNA 1190 		ENSMUST00000116925 (Mir1190-201) 101021673-101021768 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UN_0001ENSG00000015133ENST00000331194ENST00000334448ENST00000389856ENST00000389857ENST00000553403ENST00000553437ENST00000554051ENST00000554165ENST00000554872ENST00000555995ENST00000556726ENST00000556767ENST00000557455ENST00000557507ENSG00000119714ENST00000529102ENST00000529300ENST00000531499ENST00000535815ENSG00000258875ENST00000553725ENST00000554096ENSG00000260810ENST00000563574ENSG00000265856ENST00000581346CIL_0001UN_0002ENSMUSG00000021182ENSMUST00000068411ENSMUST00000085096ENSMUSG00000021185ENSMUST00000069782ENSMUST00000110069ENSMUST00000110070ENSMUST00000110073ENSMUST00000124957ENSMUST00000133970ENSMUST00000154603ENSMUST00000167322ENSMUSG00000047415ENSMUST00000053668ENSMUST00000110065ENSMUST00000110066ENSMUST00000124459ENSMUST00000128306ENSMUST00000135684ENSMUSG00000080575ENSMUST00000116925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UN_0001ENSG00000015133ENST00000331194ENST00000389857ENST00000553403ENST00000553437ENST00000556726ENSG00000119714ENST00000529102ENST00000529300ENST00000531499ENST00000535815ENSG00000258875ENST00000553725ENST00000554096ENSG00000260810ENST00000563574ENSG00000265856ENST00000581346CIL_0001UN_0002ENSMUSG00000021182ENSMUST00000068411ENSMUST00000085096ENSMUSG00000021185ENSMUST00000069782ENSMUST00000110069ENSMUST00000110070ENSMUST00000110073ENSMUST00000167322ENSMUSG00000047415ENSMUST00000053668ENSMUST00000110065ENSMUST00000110066ENSMUST00000135684ENSMUSG00000080575ENSMUST00000116925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000015133 ENST00000331194 N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 0.207±0.00 N/A N/A 1.842±0.00 0.709±0.00 3.048±0.00
ENST00000334448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389857 3.076±0.00 7.748±0.00 N/A 0.487±0.41 2.040±0.35 0.695±0.33 0.410±0.25 1.944±0.00 0.141±0.00 2.337±1.57 0.093±0.00 2.494±1.35 0.691±0.07 4.333±2.02
ENST00000553403 N/A N/A N/A N/A N/A 0.526±0.00 N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A
ENST00000553437 N/A N/A N/A N/A N/A N/A N/A 2.548±0.00 N/A N/A N/A N/A N/A N/A
ENST00000554051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556726 N/A 7.306±0.00 N/A N/A N/A 0.449±0.00 N/A 1.327±0.00 N/A 3.332±0.00 N/A 1.396±0.00 0.515±0.00 N/A
ENST00000556767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119714 ENST00000529102 N/A N/A 1.019±0.00 0.127±0.00 1.110±0.00 0.446±0.13 0.347±0.00 N/A 0.974±0.93 1.295±0.00 0.341±0.29 0.384±0.00 1.009±0.00 0.865±0.00
ENST00000529300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A
ENST00000531499 0.514±0.00 7.671±0.00 N/A 0.398±0.00 0.758±0.00 0.339±0.00 0.162±0.00 0.460±0.39 0.550±0.00 9.076±0.00 0.053±0.00 1.000±0.27 2.116±0.93 N/A
ENST00000535815 N/A N/A 0.121±0.00 0.215±0.00 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A 0.516±0.19 N/A
ENSG00000258875 ENST00000553725 N/A N/A N/A N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554096 0.093±0.00 N/A N/A 0.239±0.00 0.208±0.00 0.172±0.00 0.056±0.00 0.248±0.00 0.020±0.00 N/A 0.080±0.00 0.167±0.00 N/A 0.315±0.00
ENSG00000260810 ENST00000563574 0.023±0.00 0.306±0.00 N/A 0.241±0.14 N/A 0.381±0.12 0.088±0.00 0.072±0.00 N/A 0.753±0.25 N/A 0.098±0.06 0.325±0.24 0.098±0.01
ENSG00000265856 ENST00000581346 N/A 0.628±0.00 N/A N/A N/A N/A N/A N/A N/A 19.094±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021182 ENSMUST00000068411 2.067±0.00 0.518±0.18 N/A 3.956±0.77 3.893±2.75 6.410±0.60 0.885±0.20 1.321±0.00 0.560±0.68 4.815±0.60 N/A 2.459±0.87 0.607±0.07 4.636±1.89
ENSMUST00000085096 N/A 0.331±0.11 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.374±0.18 N/A
ENSMUSG00000021185 ENSMUST00000069782 2.476±0.36 2.247±0.74 4.516±0.61 0.127±0.00 1.857±0.59 1.782±0.96 5.801±1.25 17.273±2.54 4.847±4.76 1.031±0.61 1.912±0.62 1.329±1.08 0.998±0.00 0.116±0.00
ENSMUST00000110069 1.641±0.00 1.190±0.00 N/A N/A N/A N/A N/A 5.519±0.00 0.215±0.00 0.383±0.00 N/A 0.897±0.28 0.252±0.00 0.195±0.00
ENSMUST00000110070 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.734±0.00 N/A 0.887±0.26 0.102±0.02 N/A
ENSMUST00000110073 N/A N/A N/A N/A N/A 0.775±0.09 N/A N/A 0.169±0.04 0.603±0.07 1.303±0.40 N/A N/A N/A
ENSMUST00000124957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167322 5.298±1.53 3.584±1.21 5.570±0.71 1.124±0.40 7.257±1.54 3.725±0.73 14.556±3.20 24.551±2.54 6.442±5.81 1.719±0.29 3.561±1.00 2.366±0.75 0.813±0.74 0.312±0.12
ENSMUSG00000047415 ENSMUST00000053668 0.294±0.05 0.275±0.15 0.284±0.12 0.725±0.35 2.400±0.97 0.719±0.32 N/A 0.292±0.16 0.020±0.01 0.782±0.18 N/A 0.453±0.16 N/A 0.518±0.39
ENSMUST00000110065 0.772±0.17 0.486±0.20 0.486±0.00 0.594±0.38 3.851±0.87 1.009±0.48 0.353±0.01 0.289±0.21 0.059±0.03 1.309±0.29 0.052±0.02 1.218±0.55 0.099±0.05 0.416±0.18
ENSMUST00000110066 0.260±0.03 0.555±0.00 0.288±0.01 0.165±0.07 0.942±0.00 N/A N/A N/A 0.015±0.00 0.356±0.00 0.127±0.06 0.460±0.22 0.037±0.00 0.292±0.00
ENSMUST00000124459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135684 N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.08 N/A N/A N/A 0.174±0.00 N/A
ENSMUSG00000080575 ENSMUST00000116925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 337.059±0.00 N/A

Loading