C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008X6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1052 VISTA 9606 6:18236397-18838036
GeneTranscriptPositionBiotype
ENSG00000124795 (DEK)
DEK proto-oncogene 		ENST00000244776 (DEK-002) 18225470-18264541 protein_coding
ENST00000397239 (DEK-001) 18223868-18264823 protein_coding
ENST00000503715 (DEK-005) 18255736-18264541 protein_coding
ENST00000505224 (DEK-003) 18225025-18264535 nonsense_mediated_decay
ENST00000507591 (DEK-009) 18225879-18249740 protein_coding
ENST00000512145 (DEK-008) 18237050-18256374 retained_intron
ENST00000515742 (DEK-006) 18256373-18264208 protein_coding
ENST00000515770 (DEK-007) 18236492-18256439 nonsense_mediated_decay
ENSG00000137393 (RNF144B)
ring finger protein 144B 		ENST00000259939 (RNF144B-001) 18387350-18468874 protein_coding
ENST00000486622 (RNF144B-002) 18387514-18402095 processed_transcript
ENSG00000199715 (Y_RNA)
Y RNA 		ENST00000362845 (Y_RNA.1-264) 18273165-18273266 misc_RNA
ENSG00000217414 (RP11-528A10.2)
 ENST00000404856 (RP11-528A10.2-001) 18363417-18365423 processed_pseudogene
ENSG00000218976 (RP11-528A10.1)
 ENST00000407347 (RP11-528A10.1-001) 18366736-18368644 unprocessed_pseudogene
CIL_0008X6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1052 VISTA 10090 13:47010584-47612217
GeneTranscriptPositionBiotype
ENSMUSG00000021376 (Tpmt)
thiopurine methyltransferase 		ENSMUST00000021806 (Tpmt-001) 47025170-47043210 protein_coding
ENSMUST00000110118 (Tpmt-002) 47025179-47043124 protein_coding
ENSMUST00000124948 (Tpmt-007) 47040114-47043138 protein_coding
ENSMUST00000133100 (Tpmt-003) 47039698-47043144 retained_intron
ENSMUST00000136864 (Tpmt-006) 47028882-47043343 protein_coding
ENSMUST00000151509 (Tpmt-005) 47025368-47044664 nonsense_mediated_decay
ENSMUST00000154802 (Tpmt-004) 47028901-47044737 protein_coding
ENSMUSG00000021377 (Dek)
DEK oncogene (DNA binding) 		ENSMUST00000021807 (Dek-001) 47084782-47106190 protein_coding
ENSMUST00000129352 (Dek-006) 47098155-47105830 protein_coding
ENSMUST00000135278 (Dek-002) 47088595-47106201 protein_coding
ENSMUST00000138401 (Dek-003) 47084775-47098438 processed_transcript
ENSMUST00000143933 (Dek-005) 47101487-47106154 processed_transcript
ENSMUST00000150652 (Dek-004) 47105381-47106183 processed_transcript
ENSMUSG00000038068 (Rnf144b)
ring finger protein 144B 		ENSMUST00000068891 (Rnf144b-201) 47122720-47247991 protein_coding
ENSMUST00000110111 (Rnf144b-202) 47194003-47247991 protein_coding
ENSMUSG00000038080 (Kdm1b)
lysine (K)-specific demethylase 1B 		ENSMUST00000037025 (Kdm1b-001) 47043499-47084600 protein_coding
ENSMUST00000128977 (Kdm1b-003) 47066458-47084613 processed_transcript
ENSMUST00000131120 (Kdm1b-005) 47064138-47072283 retained_intron
ENSMUST00000143518 (Kdm1b-002) 47063006-47084596 protein_coding
ENSMUST00000143868 (Kdm1b-004) 47043570-47053730 protein_coding
ENSMUSG00000044231 (Nhlrc1)
NHL repeat containing 1 		ENSMUST00000052747 (Nhlrc1-201) 47012558-47014850 protein_coding
ENSMUSG00000051606 (2010001K21Rik)
RIKEN cDNA 2010001K21 gene 		ENSMUST00000060680 (2010001K21Rik-201) 47010673-47011195 pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X6_0001ENSG00000124795ENST00000244776ENST00000397239ENST00000503715ENST00000505224ENST00000507591ENST00000512145ENST00000515742ENST00000515770ENSG00000137393ENST00000259939ENST00000486622ENSG00000199715ENST00000362845ENSG00000217414ENST00000404856ENSG00000218976ENST00000407347CIL_0008X6_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X6_0001ENSG00000124795ENST00000244776ENST00000397239ENST00000505224ENST00000512145ENSG00000137393ENST00000259939ENSG00000199715ENST00000362845ENSG00000217414ENST00000404856ENSG00000218976ENST00000407347CIL_0008X6_0002ENSMUSG00000021376ENSMUST00000021806ENSMUST00000110118ENSMUST00000124948ENSMUST00000136864ENSMUST00000151509ENSMUST00000154802ENSMUSG00000021377ENSMUST00000021807ENSMUST00000129352ENSMUST00000135278ENSMUST00000138401ENSMUST00000143933ENSMUST00000150652ENSMUSG00000038068ENSMUST00000068891ENSMUST00000110111ENSMUSG00000038080ENSMUST00000037025ENSMUST00000128977ENSMUST00000131120ENSMUST00000143518ENSMUST00000143868ENSMUSG00000044231ENSMUST00000052747ENSMUSG00000051606ENSMUST00000060680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124795 ENST00000244776 N/A N/A N/A N/A 7.899±0.00 N/A 0.995±0.00 N/A 7.022±0.00 N/A N/A N/A N/A N/A
ENST00000397239 N/A N/A 1.546±0.00 4.808±0.00 8.994±0.00 9.360±0.00 2.061±0.00 7.352±0.00 13.221±0.00 11.941±0.00 1.936±0.00 8.572±2.45 9.270±6.53 N/A
ENST00000503715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505224 11.986±0.00 N/A 0.667±0.00 4.617±0.00 N/A 16.021±0.00 7.351±0.00 N/A N/A N/A 1.304±0.00 7.825±0.00 N/A 7.406±0.00
ENST00000507591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512145 N/A N/A 1.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137393 ENST00000259939 6.148±0.00 3.526±0.00 2.816±0.00 1.335±0.29 3.697±1.70 1.643±0.71 2.185±0.90 5.567±1.58 1.787±0.32 7.959±0.01 6.502±0.96 0.992±0.52 4.317±0.72 3.073±0.00
ENST00000486622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199715 ENST00000362845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.027±0.00
ENSG00000217414 ENST00000404856 N/A 0.011±0.00 N/A N/A 0.005±0.00 N/A N/A N/A N/A 0.005±0.00 0.241±0.00 0.013±0.00 N/A 0.132±0.06
ENSG00000218976 ENST00000407347 0.015±0.00 N/A N/A N/A 0.027±0.01 0.016±0.00 0.083±0.00 N/A N/A N/A 0.116±0.00 N/A 0.043±0.00 0.185±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021376 ENSMUST00000021806 2.321±0.00 1.097±0.26 2.570±0.43 2.902±1.89 0.905±0.00 2.633±1.65 1.000±0.51 13.845±0.00 5.688±1.57 0.839±0.28 0.454±0.13 1.134±1.11 3.192±3.00 1.427±0.00
ENSMUST00000110118 N/A 0.385±0.00 N/A 0.674±0.00 1.344±0.00 0.672±0.00 0.312±0.00 N/A 5.877±3.31 N/A N/A 1.916±1.21 0.775±0.36 0.136±0.00
ENSMUST00000124948 N/A N/A N/A 1.046±0.00 N/A 3.238±0.00 N/A N/A 3.288±0.00 0.896±0.00 N/A 4.117±0.00 3.428±2.51 N/A
ENSMUST00000133100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136864 N/A 0.204±0.07 N/A 1.224±0.00 N/A N/A 0.471±0.15 N/A 1.297±0.00 0.158±0.00 0.686±0.00 0.819±0.06 1.488±0.00 N/A
ENSMUST00000151509 N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A 0.383±0.04 N/A N/A
ENSMUST00000154802 N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.16 N/A 0.663±0.00
ENSMUSG00000021377 ENSMUST00000021807 1.417±0.63 N/A 23.149±3.61 17.429±1.42 3.332±1.63 3.530±1.15 1.061±0.48 2.697±0.39 58.895±65.03 4.818±1.68 4.950±2.28 7.070±6.34 24.501±8.95 2.099±0.99
ENSMUST00000129352 N/A N/A N/A 16.393±0.00 N/A N/A N/A N/A N/A N/A N/A 22.145±19.09 26.095±8.65 25.398±0.00
ENSMUST00000135278 N/A 29.738±15.56 N/A N/A 13.686±0.94 10.592±3.61 N/A 4.270±0.76 4.608±1.96 6.881±2.11 N/A 25.564±13.83 N/A 1.858±0.45
ENSMUST00000138401 1.497±1.03 N/A N/A 6.403±2.20 3.855±0.85 3.150±0.27 1.041±0.31 3.494±0.20 11.034±9.83 3.189±0.47 N/A 10.365±4.75 10.085±6.33 1.894±1.23
ENSMUST00000143933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.243±0.00
ENSMUST00000150652 N/A 32.807±8.78 N/A N/A 4.222±0.00 8.238±1.74 N/A 4.519±0.86 1.829±0.19 7.911±3.27 N/A 4.385±0.55 N/A N/A
ENSMUSG00000038068 ENSMUST00000068891 N/A N/A N/A 1.910±0.00 N/A N/A N/A N/A 1.161±0.68 N/A 1.069±0.12 1.839±0.97 1.395±0.00 1.768±0.52
ENSMUST00000110111 6.867±1.40 1.970±0.62 22.827±0.30 0.925±0.66 5.441±0.28 1.649±0.38 3.513±0.19 1.486±0.09 6.245±4.75 10.762±0.15 5.672±0.88 8.533±2.62 4.351±1.48 7.220±2.53
ENSMUSG00000038080 ENSMUST00000037025 2.127±0.70 5.342±0.87 8.566±0.12 7.979±5.72 6.972±3.19 9.142±3.74 2.261±0.59 5.736±0.99 4.585±2.66 3.339±1.38 2.193±0.35 7.611±3.55 7.316±4.49 1.189±0.16
ENSMUST00000128977 N/A N/A 37.897±1.18 0.505±0.00 0.638±0.00 6.449±0.23 N/A N/A N/A N/A 0.341±0.00 N/A N/A N/A
ENSMUST00000131120 N/A N/A N/A 2.776±0.00 N/A N/A N/A N/A N/A N/A N/A 11.893±0.00 13.331±1.54 2.612±0.00
ENSMUST00000143518 N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A N/A 0.485±0.07 1.802±0.19 4.593±1.02 0.400±0.00
ENSMUST00000143868 N/A N/A N/A 4.571±0.00 N/A N/A N/A N/A N/A N/A N/A 19.679±0.00 27.736±0.41 3.068±0.00
ENSMUSG00000044231 ENSMUST00000052747 1.766±0.28 6.555±1.13 2.276±0.43 3.215±0.89 1.932±0.34 4.086±0.32 3.172±0.32 1.290±0.18 0.788±0.49 3.622±0.68 2.704±0.29 5.313±2.71 0.191±0.09 0.336±0.17
ENSMUSG00000051606 ENSMUST00000060680 0.386±0.16 0.157±0.08 0.385±0.00 0.390±0.00 0.409±0.26 3.524±0.97 N/A 0.202±0.12 0.080±0.02 2.059±0.28 0.178±0.01 4.041±1.30 0.266±0.31 1.289±0.68

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