C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022163 Btf3-001 ENSMUSG00000021660 10090 - 13:98309896-98316967 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015031 IEA protein transport
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051295 btf3-001 protein_coding Danio_rerio 0 486
ENSDART00000134516 btf3-003 protein_coding Danio_rerio 0 486
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 1033
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 1282
ENST00000407097 BTF3P7-001 processed_pseudogene Homo_sapiens 0 608
ENST00000414577 BTF3P8-001 processed_pseudogene Homo_sapiens 0 573
ENST00000418784 BTF3P9-001 processed_pseudogene Homo_sapiens 0 368
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 649
ENST00000426582 BTF3P11-001 processed_pseudogene Homo_sapiens 0 516
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 680
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 610
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 0 401
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 682
ENST00000509708 BTF3-006 protein_coding Homo_sapiens 0 348
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 531
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 0 375
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 617
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 756
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 845
ENST00000519620 BTF3P12-001 processed_pseudogene Homo_sapiens 0 547
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 457
ENST00000547436 BTF3P2-001 processed_pseudogene Homo_sapiens 0 551

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