C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152704 Btf3-002 ENSMUSG00000021660 10090 - 13:98309897-98317006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000152704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000152704 14.566±5.00 3.124±0.00 184.076±8.91 77.307±40.52 7.079±1.64 11.136±4.26 11.344±2.73 16.453±3.83 85.799±97.60 9.321±2.34 109.978±4.68 176.164±13.61 201.398±74.19 79.616±56.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000134516 btf3-003 protein_coding Danio_rerio 0 488
ENSDART00000051295 btf3-001 protein_coding Danio_rerio 0 484
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 1173
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 1033
ENST00000407097 BTF3P7-001 processed_pseudogene Homo_sapiens 0 608
ENST00000414577 BTF3P8-001 processed_pseudogene Homo_sapiens 0 573
ENST00000418784 BTF3P9-001 processed_pseudogene Homo_sapiens 0 368
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 649
ENST00000426582 BTF3P11-001 processed_pseudogene Homo_sapiens 0 516
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 682
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 610
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 0 401
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 749
ENST00000509708 BTF3-006 protein_coding Homo_sapiens 0 348
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 283
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 3e-32 143
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 619
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 756
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 845
ENST00000519620 BTF3P12-001 processed_pseudogene Homo_sapiens 0 553
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 457
ENST00000547436 BTF3P2-001 processed_pseudogene Homo_sapiens 0 551

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