C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133826 Btf3-004 ENSMUSG00000021660 10090 - 13:98313039-98316996 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainOvaryPlacentaENSMUST00000133826
Transcript ID Bladder Brain Ovary Placenta
ENSMUST00000133826 91.371±33.70 40.155±0.00 11.600±2.34 65.884±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 721
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 582
ENST00000407097 BTF3P7-001 processed_pseudogene Homo_sapiens 0 448
ENST00000414577 BTF3P8-001 processed_pseudogene Homo_sapiens 0 368
ENST00000418784 BTF3P9-001 processed_pseudogene Homo_sapiens 0 233
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 505
ENST00000426582 BTF3P11-001 processed_pseudogene Homo_sapiens 0 401
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 534
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 470
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 0 302
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 649
ENST00000509708 BTF3-006 protein_coding Homo_sapiens 0 322
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 283
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 3e-32 143
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 481
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 401
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 457
ENST00000519620 BTF3P12-001 processed_pseudogene Homo_sapiens 0 409
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 390
ENST00000547436 BTF3P2-001 processed_pseudogene Homo_sapiens 0 433

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