C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 8B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021684 Pde8b 10090 - 13:95024454-95250336 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022192 Pde8b-014 95026120-95222813 protein_coding
  ENSMUST00000067082 Pde8b-013 95026120-95222813 protein_coding
  ENSMUST00000159598 Pde8b-008 95100919-95250315 protein_coding
  ENSMUST00000159608 Pde8b-003 95033946-95223555 protein_coding
  ENSMUST00000160412 Pde8b-011 95043468-95053018 retained_intron
  ENSMUST00000160957 Pde8b-009 95043022-95250274 protein_coding
  ENSMUST00000162153 Pde8b-004 95026103-95250166 protein_coding
  ENSMUST00000162292 Pde8b-005 95024505-95223066 protein_coding
  ENSMUST00000162328 Pde8b-002 95090069-95223066 retained_intron
  ENSMUST00000162412 Pde8b-001 95024454-95250336 protein_coding
  ENSMUST00000162670 Pde8b-007 95024459-95034253 protein_coding
  ENSMUST00000162716 Pde8b-010 95104688-95186317 processed_transcript
  ENSMUST00000162882 Pde8b-006 95025330-95046066 processed_transcript
  ENSMUST00000172104 Pde8b-012 95026120-95222813 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022192ENSMUST00000067082ENSMUST00000159598ENSMUST00000159608ENSMUST00000160412ENSMUST00000160957ENSMUST00000162153ENSMUST00000162292ENSMUST00000162328ENSMUST00000162412ENSMUST00000162670ENSMUST00000162716ENSMUST00000162882ENSMUST00000172104
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022192 0.572±0.11 N/A N/A N/A N/A N/A 0.429±0.00 1.725±0.33 0.203±0.00 7.361±0.27 N/A 2.002±0.18 N/A N/A
ENSMUST00000067082 N/A N/A N/A N/A N/A N/A N/A 0.973±0.01 N/A N/A 0.234±0.00 1.010±0.00 N/A N/A
ENSMUST00000159598 N/A N/A N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159608 N/A 12.019±0.00 0.194±0.00 N/A 0.412±0.02 N/A N/A N/A 0.135±0.00 N/A 0.225±0.05 N/A N/A N/A
ENSMUST00000160412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A
ENSMUST00000160957 N/A N/A N/A N/A N/A 3.118±0.26 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162153 N/A N/A N/A 7.419±6.89 N/A N/A N/A 1.803±0.00 0.115±0.00 N/A 0.287±0.00 N/A 0.180±0.10 0.334±0.05
ENSMUST00000162292 0.384±0.24 N/A 0.159±0.03 1.527±0.48 0.255±0.07 1.078±0.10 N/A 1.445±0.63 0.090±0.06 4.661±0.47 0.189±0.01 N/A 0.074±0.00 N/A
ENSMUST00000162328 1.044±0.11 71.646±11.09 N/A N/A 1.294±0.18 1.513±0.50 N/A 1.877±0.58 0.295±0.09 26.237±15.96 N/A 7.643±2.02 N/A 0.456±0.03
ENSMUST00000162412 0.107±0.00 N/A 0.193±0.00 0.392±0.00 N/A 1.349±0.42 0.321±0.09 0.886±0.18 0.042±0.01 N/A 0.351±0.00 3.100±0.99 0.197±0.01 0.401±0.17
ENSMUST00000162670 N/A N/A 0.491±0.04 8.380±7.55 N/A N/A 0.416±0.00 N/A 0.154±0.04 N/A 0.537±0.19 3.740±0.00 0.255±0.11 0.176±0.00
ENSMUST00000162716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.680±0.00
ENSMUST00000162882 0.342±0.26 N/A 0.247±0.00 N/A 0.559±0.13 1.702±0.21 0.638±0.00 1.071±0.00 0.156±0.05 N/A 0.140±0.00 2.904±0.00 0.132±0.00 0.378±0.11
ENSMUST00000172104 0.237±0.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.505±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DK CIL_0008DK_0002 VISTA 13:94516164-95118068
CIL_00091A CIL_00091A_0002 VISTA 13:94568895-95169433
CIL_000979 CIL_000979_0002 VISTA 13:94573844-95174877
CIL_0000CH CIL_0000CH_0002 CGP 13:94976344-95250336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system
GO:0001662 IMP behavioral fear response
GO:0004115 IDA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0004871 IEA signal transducer activity
GO:0005575 ND cellular_component
GO:0006198 IEA cAMP catabolic process
GO:0008152 IDA:IEA metabolic process
GO:0008542 IMP visual learning
GO:0035106 IMP operant conditioning
GO:0046676 IEA negative regulation of insulin secretion
GO:0046872 IEA metal ion binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0090032 IMP negative regulation of steroid hormone biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063706 pde8b phosphodiesterase 8B protein_coding Danio_rerio
ENSG00000113231 PDE8B phosphodiesterase 8B protein_coding Homo_sapiens

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