C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162292 Pde8b-005 ENSMUSG00000021684 10090 - 13:95024505-95223066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMusclePlacentaENSMUST00000162292
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Placenta
ENSMUST00000162292 0.384±0.24 0.159±0.03 1.527±0.48 0.255±0.07 1.078±0.10 1.445±0.63 0.090±0.06 4.661±0.47 0.189±0.01 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DK CIL_0008DK_0002 VISTA 13:94516164-95118068
CIL_00091A CIL_00091A_0002 VISTA 13:94568895-95169433
CIL_000979 CIL_000979_0002 VISTA 13:94573844-95174877
CIL_0000CH CIL_0000CH_0002 CGP 13:94976344-95250336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system
GO:0001662 IMP behavioral fear response
GO:0004115 IDA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005575 ND cellular_component
GO:0008152 IEA:IDA metabolic process
GO:0008542 IMP visual learning
GO:0035106 IMP operant conditioning
GO:0046676 IEA negative regulation of insulin secretion
GO:0046872 IEA metal ion binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0090032 IMP negative regulation of steroid hormone biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264917 PDE8B-001 protein_coding Homo_sapiens 0 2006
ENST00000310298 PDE8A-001 protein_coding Homo_sapiens 0 494
ENST00000333194 PDE8B-005 protein_coding Homo_sapiens 0 1498
ENST00000339708 PDE8A-002 protein_coding Homo_sapiens 0 494
ENST00000340978 PDE8B-002 protein_coding Homo_sapiens 0 2006
ENST00000342343 PDE8B-004 protein_coding Homo_sapiens 0 1986
ENST00000346042 PDE8B-003 protein_coding Homo_sapiens 0 3175
ENST00000394553 PDE8A-201 protein_coding Homo_sapiens 0 494
ENST00000478717 PDE8A-003 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000485596 PDE8A-004 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000503963 PDE8B-009 protein_coding Homo_sapiens 0 346
ENST00000505283 PDE8B-006 protein_coding Homo_sapiens 0 1519
ENST00000505926 PDE8B-007 protein_coding Homo_sapiens 0 797
ENST00000557957 PDE8A-005 protein_coding Homo_sapiens 0 494
ENST00000559742 PDE8A-006 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000560789 PDE8A-007 retained_intron Homo_sapiens 0 494
ENST00000561024 PDE8A-008 retained_intron Homo_sapiens 0 348

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