C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: orthopedia homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021685 Otp 10090 + 13:94875602-94885130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022195 Otp-001 94875602-94885130 protein_coding
  ENSMUST00000184985 Otp-002 94882600-94883552 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaTestisENSMUST00000022195ENSMUST00000184985
Transcript ID Brain Liver Placenta Testis
ENSMUST00000022195 6.950±5.59 0.004±0.00 0.009±0.00 0.016±0.00
ENSMUST00000184985 N/A N/A 0.011±0.00 0.060±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091D CIL_00091D_0002 VISTA 13:94295529-94897246
CIL_00091C CIL_00091C_0002 VISTA 13:94401860-95002912
CIL_0007SL CIL_0007SL_0002 VISTA 13:94405527-95008908
CIL_00091B CIL_00091B_0002 VISTA 13:94409854-95010891
CIL_0007OX CIL_0007OX_0003 UCNEbase 13:94415287-94941964
CIL_0008DK CIL_0008DK_0002 VISTA 13:94516164-95118068
CIL_00091A CIL_00091A_0002 VISTA 13:94568895-95169433
CIL_000979 CIL_000979_0002 VISTA 13:94573844-95174877
CIL_00023D CIL_00023D_0002 CGP 13:94788943-94885130
CIL_000239 CIL_000239_0002 CGP 13:94875602-95023314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002052 IMP positive regulation of neuroblast proliferation
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0021879 IMP forebrain neuron differentiation
GO:0021979 IMP hypothalamus cell differentiation
GO:0021985 IMP neurohypophysis development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014201 otpa orthopedia homolog a protein_coding Danio_rerio
ENSDARG00000058379 otpb orthopedia homolog b protein_coding Danio_rerio
ENSG00000171540 OTP orthopedia homeobox protein_coding Homo_sapiens

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