C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: orthopedia homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171540 OTP 9606 - 5:77628712-77639688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306422 OTP-001 77628712-77639688 protein_coding
  ENST00000515716 OTP-002 77635931-77636993 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENST00000306422ENST00000515716
Transcript ID Heart Testis
ENST00000306422 0.011±0.00 0.143±0.02
ENST00000515716 N/A 0.180±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000979 CIL_000979_0001 VISTA 5:77339400-77940441
CIL_00091A CIL_00091A_0001 VISTA 5:77345011-77945571
CIL_0008DK CIL_0008DK_0001 VISTA 5:77424780-78026683
CIL_00091B CIL_00091B_0001 VISTA 5:77543897-78144918
CIL_0007SL CIL_0007SL_0001 VISTA 5:77545919-78149307
CIL_00091C CIL_00091C_0001 VISTA 5:77551756-78152775
CIL_0007OX CIL_0007OX_0001 UCNEbase 5:77560331-77741345

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002052 IEA positive regulation of neuroblast proliferation
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0021879 IEA forebrain neuron differentiation
GO:0021979 IEA hypothalamus cell differentiation
GO:0021985 IEA neurohypophysis development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014201 otpa orthopedia homolog a protein_coding Danio_rerio
ENSDARG00000058379 otpb orthopedia homolog b protein_coding Danio_rerio
ENSMUSG00000021685 Otp orthopedia homolog (Drosophila) protein_coding Mus_musculus

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