C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member F4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138884 Slc35f4-002 ENSMUSG00000021852 10090 - 14:49298519-49525865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000138884
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000138884 0.027±0.00 3.934±0.00 0.053±0.00 0.100±0.00 0.025±0.01 0.033±0.00 0.023±0.00 0.030±0.00 0.055±0.01 0.003±0.00 0.039±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0002 CGP 14:49226358-49526046
CIL_00022F CIL_00022F_0002 CGP 14:49298519-49783383

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339762 SLC35F4-201 protein_coding Homo_sapiens 0 1363
ENST00000554729 SLC35F4-001 protein_coding Homo_sapiens 0 1312
ENST00000556306 SLC35F4-008 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000556826 SLC35F4-004 protein_coding Homo_sapiens 0 1363
ENST00000557254 SLC35F4-007 nonsense_mediated_decay Homo_sapiens 0 763

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