C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member F4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123534 Slc35f4-004 ENSMUSG00000021852 10090 - 14:49312091-49526046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungOvaryPlacentaTestisENSMUST00000123534
Transcript ID Brain Liver Lung Ovary Placenta Testis
ENSMUST00000123534 0.374±0.04 0.003±0.00 0.017±0.00 0.008±0.00 0.006±0.00 0.039±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0002 CGP 14:49226358-49526046
CIL_00022F CIL_00022F_0002 CGP 14:49298519-49783383

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339762 SLC35F4-201 protein_coding Homo_sapiens 0 941
ENST00000554729 SLC35F4-001 protein_coding Homo_sapiens 0 931
ENST00000556826 SLC35F4-004 protein_coding Homo_sapiens 0 1315
ENST00000557254 SLC35F4-007 nonsense_mediated_decay Homo_sapiens 0 942

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