C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 49, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022378 Fam49b 10090 - 15:63929097-64060448 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063838 Fam49b-201 63929097-64060448 protein_coding
  ENSMUST00000164532 Fam49b-202 63930944-63997969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063838ENSMUST00000164532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063838 1.365±0.16 1.826±0.42 1.910±0.00 13.197±4.20 1.742±0.36 1.955±0.60 0.632±0.00 1.064±0.48 0.649±0.43 1.644±0.35 7.348±0.31 3.256±2.53 N/A 1.266±0.16
ENSMUST00000164532 5.266±0.58 2.663±0.38 17.077±0.08 17.208±4.97 9.933±3.15 3.130±0.38 2.921±0.65 3.487±0.66 11.752±10.09 5.700±1.44 2.571±0.00 10.553±4.14 28.792±7.64 7.319±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0002 VISTA 15:63374092-63976818
CIL_0007U4 CIL_0007U4_0002 VISTA 15:63374837-63976253
CIL_0004ZN CIL_0004ZN_0002 CGP 15:63891264-64060448
CIL_0004ZM CIL_0004ZM_0002 CGP 15:63929097-64382919

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005929 IDA cilium
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045417 fam49bb family with sequence similarity 49, member Bb protein_coding Danio_rerio
ENSG00000153310 FAM49B family with sequence similarity 49, member B protein_coding Homo_sapiens

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