C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 49, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164532 Fam49b-202 ENSMUSG00000022378 10090 - 15:63930944-63997969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164532 5.266±0.58 2.663±0.38 17.077±0.08 17.208±4.97 9.933±3.15 3.130±0.38 2.921±0.65 3.487±0.66 11.752±10.09 5.700±1.44 2.571±0.00 10.553±4.14 28.792±7.64 7.319±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0002 VISTA 15:63374092-63976818
CIL_0007U4 CIL_0007U4_0002 VISTA 15:63374837-63976253
CIL_0004ZN CIL_0004ZN_0002 CGP 15:63891264-64060448
CIL_0004ZM CIL_0004ZM_0002 CGP 15:63929097-64382919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005929 IDA cilium
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401979 FAM49B-005 protein_coding Homo_sapiens 0 2361
ENST00000444170 AC016772.4-001 processed_pseudogene Homo_sapiens 0 617
ENST00000517654 FAM49B-009 protein_coding Homo_sapiens 0 2412
ENST00000517672 FAM49B-026 protein_coding Homo_sapiens 0 353
ENST00000517801 FAM49B-027 retained_intron Homo_sapiens 0 739
ENST00000518167 FAM49B-015 protein_coding Homo_sapiens 0 366
ENST00000518283 FAM49B-016 protein_coding Homo_sapiens 0 592
ENST00000519020 FAM49B-024 protein_coding Homo_sapiens 0 387
ENST00000519070 FAM49B-022 protein_coding Homo_sapiens 0 276
ENST00000519110 FAM49B-008 protein_coding Homo_sapiens 0 2431
ENST00000519142 FAM49B-018 protein_coding Homo_sapiens 0 776
ENST00000519540 FAM49B-004 protein_coding Homo_sapiens 0 2399
ENST00000519824 FAM49B-001 protein_coding Homo_sapiens 0 2435
ENST00000520204 FAM49B-025 protein_coding Homo_sapiens 0 523
ENST00000520254 FAM49B-023 protein_coding Homo_sapiens 0 436
ENST00000520887 FAM49B-028 retained_intron Homo_sapiens 0 239
ENST00000521223 FAM49B-020 processed_transcript Homo_sapiens 0 427
ENST00000522250 FAM49B-010 protein_coding Homo_sapiens 0 2191
ENST00000522361 FAM49B-017 protein_coding Homo_sapiens 0 329
ENST00000522702 FAM49B-019 processed_transcript Homo_sapiens 0 438
ENST00000522746 FAM49B-002 protein_coding Homo_sapiens 0 2364
ENST00000522941 FAM49B-003 protein_coding Homo_sapiens 0 1812
ENST00000523288 FAM49B-007 retained_intron Homo_sapiens 0 1247
ENST00000523509 FAM49B-006 protein_coding Homo_sapiens 0 2364
ENST00000523993 FAM49B-011 protein_coding Homo_sapiens 0 562
ENST00000615041 FAM49B-201 protein_coding Homo_sapiens 0 1081

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