C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CREB binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022521 Crebbp 10090 - 16:4081328-4213407 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023165 Crebbp-001 4081328-4213407 protein_coding
  ENSMUST00000191387 Crebbp-002 4086610-4089743 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023165 9.163±4.70 15.477±4.02 6.097±3.20 4.192±1.06 8.705±4.22 9.193±2.54 2.974±0.83 6.895±1.30 2.598±0.53 10.149±1.62 1.943±0.35 8.421±3.21 4.067±1.34 3.844±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029G CIL_00029G_0003 CGP 16:4039971-4213407
CIL_00000C CIL_00000C_0003 CGP 16:4081328-4420498

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000123 IDA histone acetyltransferase complex
GO:0000790 IEA nuclear chromatin
GO:0000940 IDA condensed chromosome outer kinetochore
GO:0000987 IEA core promoter proximal region sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0001191 IEA RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription
GO:0002039 IEA p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0016407 IDA acetyltransferase activity
GO:0016573 IEA histone acetylation
GO:0016604 IEA nuclear body
GO:0016605 ISO PML body
GO:0018076 IEA N-terminal peptidyl-lysine acetylation
GO:0030718 IMP germ-line stem cell maintenance
GO:0043426 IEA MRF binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060976 CREBBP (1 of 3) CREB binding protein protein_coding Danio_rerio
ENSDARG00000061308 crebbpa CREB binding protein a protein_coding Danio_rerio
ENSDARG00000063102 crebbpb CREB binding protein b protein_coding Danio_rerio
ENSG00000005339 CREBBP CREB binding protein protein_coding Homo_sapiens

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