C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00000C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060976-ENSDARG00000091053 CGP 7955 3:9865824-9959979
GeneTranscriptPositionBiotype
ENSDARG00000060976 (CREBBP (1 of 3))
CREB binding protein 		ENSDART00000091863 (CREBBP (1 of 3)-202) 9868817-9884599 protein_coding
ENSDART00000115164 (CREBBP (1 of 3)-201) 9865824-9884599 protein_coding
ENSDARG00000091053 (ADCY9 (2 of 2))
adenylate cyclase 9 		ENSDART00000126781 (ADCY9 (2 of 2)-201) 9943142-9959979 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00000C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005339-ENSG00000162104 CGP 9606 16:3725054-4116185
GeneTranscriptPositionBiotype
ENSG00000005339 (CREBBP)
CREB binding protein 		ENST00000262367 (CREBBP-001) 3725054-3880726 protein_coding
ENST00000382070 (CREBBP-003) 3727539-3880120 protein_coding
ENST00000570939 (CREBBP-008) 3739614-3767832 protein_coding
ENST00000571763 (CREBBP-013) 3731908-3736999 retained_intron
ENST00000571826 (CREBBP-006) 3773636-3778172 protein_coding
ENST00000572134 (CREBBP-005) 3773636-3780867 protein_coding
ENST00000572569 (CREBBP-009) 3740443-3745654 retained_intron
ENST00000573517 (CREBBP-011) 3739446-3751808 protein_coding
ENST00000573672 (CREBBP-007) 3767302-3770703 retained_intron
ENST00000574740 (CREBBP-012) 3736508-3744957 retained_intron
ENST00000575237 (CREBBP-010) 3773740-3774746 retained_intron
ENST00000576720 (CREBBP-004) 3731911-3743468 retained_intron
ENSG00000162104 (ADCY9)
adenylate cyclase 9 		ENST00000294016 (ADCY9-001) 3962651-4116185 protein_coding
ENST00000571467 (ADCY9-004) 3989084-4113925 nonsense_mediated_decay
ENST00000571889 (ADCY9-005) 3989089-4054190 processed_transcript
ENST00000572288 (ADCY9-003) 3992222-4114026 protein_coding
ENST00000574721 (ADCY9-002) 3981773-3984150 retained_intron
ENST00000575550 (ADCY9-006) 3983392-4015682 processed_transcript
ENST00000576936 (ADCY9-007) 3953387-3989000 protein_coding
ENSG00000262185 (RP11-462G12.1)
 ENST00000576810 (RP11-462G12.1-001) 3947609-3950444 sense_overlapping
ENSG00000262516 (RP11-95J11.1)
 ENST00000572774 (RP11-95J11.1-001) 3840528-3841010 processed_pseudogene
ENSG00000262888 (RP11-462G12.2)
 ENST00000571302 (RP11-462G12.2-001) 3931217-3946305 sense_overlapping
ENSG00000263159 (RP11-462G12.4)
 ENST00000571169 (RP11-462G12.4-001) 4032012-4032936 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00000C_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022521-ENSMUSG00000005580 CGP 10090 16:4081328-4420498
GeneTranscriptPositionBiotype
ENSMUSG00000005580 (Adcy9)
adenylate cyclase 9 		ENSMUST00000005719 (Adcy9-201) 4287545-4419587 protein_coding
ENSMUST00000117801 (Adcy9-001) 4287529-4419808 protein_coding
ENSMUST00000120080 (Adcy9-002) 4287529-4420498 protein_coding
ENSMUSG00000022521 (Crebbp)
CREB binding protein 		ENSMUST00000023165 (Crebbp-001) 4081328-4213407 protein_coding
ENSMUST00000191387 (Crebbp-002) 4086610-4089743 retained_intron
ENSMUSG00000084304 (Gm6142)
predicted pseudogene 6142 		ENSMUST00000120290 (Gm6142-001) 4320356-4320680 processed_pseudogene
ENSMUSG00000089645 (Gm5766)
predicted gene 5766 		ENSMUST00000160520 (Gm5766-002) 4229230-4231206 processed_transcript
ENSMUST00000161633 (Gm5766-001) 4230301-4231099 transcribed_processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000C_0001ENSDARG00000060976ENSDART00000091863ENSDART00000115164ENSDARG00000091053ENSDART00000126781CIL_00000C_0002ENSG00000005339ENST00000262367ENST00000382070ENST00000570939ENST00000571763ENST00000571826ENST00000572134ENST00000572569ENST00000573517ENST00000573672ENST00000574740ENST00000575237ENST00000576720ENSG00000162104ENST00000294016ENST00000571467ENST00000571889ENST00000572288ENST00000574721ENST00000575550ENST00000576936ENSG00000262185ENST00000576810ENSG00000262516ENST00000572774ENSG00000262888ENST00000571302ENSG00000263159ENST00000571169CIL_00000C_0003ENSMUSG00000005580ENSMUST00000005719ENSMUST00000117801ENSMUST00000120080ENSMUSG00000022521ENSMUST00000023165ENSMUST00000191387ENSMUSG00000084304ENSMUST00000120290ENSMUSG00000089645ENSMUST00000160520ENSMUST00000161633
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000C_0001ENSDARG00000060976ENSDART00000091863ENSDART00000115164ENSDARG00000091053ENSDART00000126781CIL_00000C_0002ENSG00000005339ENST00000262367ENST00000382070ENST00000571763ENSG00000162104ENST00000294016ENSG00000262185ENST00000576810ENSG00000262516ENST00000572774ENSG00000262888ENST00000571302ENSG00000263159ENST00000571169CIL_00000C_0003ENSMUSG00000005580ENSMUST00000005719ENSMUST00000117801ENSMUST00000120080ENSMUSG00000022521ENSMUST00000023165ENSMUSG00000084304ENSMUST00000120290ENSMUSG00000089645ENSMUST00000160520ENSMUST00000161633
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060976 ENSDART00000091863 N/A N/A N/A 0.263±0.00 N/A N/A N/A 0.539±0.30 0.061±0.00 N/A N/A N/A N/A N/A
ENSDART00000115164 N/A N/A N/A 0.438±0.38 N/A N/A 0.297±0.00 0.046±0.00 0.087±0.00 N/A 0.273±0.00 N/A N/A N/A
ENSDARG00000091053 ENSDART00000126781 N/A N/A N/A 0.419±0.14 N/A N/A 0.136±0.06 N/A N/A N/A 0.050±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005339 ENST00000262367 4.333±0.00 3.801±0.00 0.760±0.00 1.599±0.72 1.943±0.00 2.937±0.00 4.194±0.00 2.672±1.47 1.400±0.18 1.508±0.00 2.116±0.00 3.374±1.76 3.744±1.82 7.164±0.35
ENST00000382070 6.209±0.00 3.056±0.00 1.448±0.00 1.407±0.93 3.194±1.81 1.472±0.44 1.970±1.47 1.182±0.00 1.432±0.00 3.394±1.50 4.886±3.50 3.613±3.60 2.003±0.17 10.453±2.21
ENST00000570939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.198±0.00 34.826±0.00 41.035±0.00
ENST00000571826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162104 ENST00000294016 5.753±0.00 2.833±0.00 2.844±0.00 2.374±0.68 2.147±0.47 6.777±0.00 6.813±4.38 3.464±0.22 2.662±0.02 4.748±2.72 16.713±8.96 5.774±4.30 3.593±1.12 1.880±0.21
ENST00000571467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262185 ENST00000576810 0.234±0.00 0.260±0.00 0.176±0.00 0.112±0.00 0.258±0.08 0.233±0.13 0.183±0.01 0.333±0.09 0.296±0.00 0.339±0.05 N/A 0.194±0.06 0.195±0.19 0.599±0.25
ENSG00000262516 ENST00000572774 N/A N/A N/A 0.083±0.00 N/A N/A 0.586±0.00 N/A N/A N/A N/A 0.782±0.54 N/A N/A
ENSG00000262888 ENST00000571302 0.157±0.00 0.233±0.00 N/A 0.090±0.00 0.160±0.00 0.043±0.00 0.180±0.01 0.306±0.00 0.014±0.00 0.334±0.00 N/A 0.104±0.05 0.100±0.02 0.396±0.15
ENSG00000263159 ENST00000571169 0.244±0.00 0.504±0.00 N/A 0.473±0.00 0.522±0.00 0.240±0.00 N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005580 ENSMUST00000005719 2.387±0.37 7.861±2.53 N/A N/A 2.623±0.59 3.367±1.48 N/A 0.802±0.00 2.288±2.10 N/A N/A 8.314±3.30 1.335±0.63 0.492±0.12
ENSMUST00000117801 1.704±0.00 14.340±6.26 N/A 1.865±0.75 3.022±0.12 1.476±0.42 N/A 2.741±0.56 2.663±2.30 8.372±0.00 N/A 6.620±3.74 1.846±0.80 0.877±0.23
ENSMUST00000120080 1.732±0.49 16.626±1.73 N/A 0.717±0.00 2.847±0.23 1.997±0.54 N/A 1.096±0.00 2.263±0.41 2.522±0.00 N/A 7.866±2.08 0.705±0.16 0.524±0.10
ENSMUSG00000022521 ENSMUST00000023165 9.163±4.70 15.477±4.02 6.097±3.20 4.192±1.06 8.705±4.22 9.193±2.54 2.974±0.83 6.895±1.30 2.598±0.53 10.149±1.62 1.943±0.35 8.421±3.21 4.067±1.34 3.844±2.06
ENSMUST00000191387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084304 ENSMUST00000120290 N/A N/A 0.100±0.00 0.127±0.07 N/A N/A N/A N/A 0.048±0.01 N/A 0.276±0.07 1.987±0.50 0.400±0.33 0.318±0.06
ENSMUSG00000089645 ENSMUST00000160520 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.005±0.00 0.910±0.43
ENSMUST00000161633 0.045±0.00 0.100±0.00 0.060±0.00 N/A 0.074±0.00 N/A N/A N/A 0.010±0.00 N/A N/A 0.057±0.00 0.081±0.07 N/A

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