C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00029G_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000089242-ENSDARG00000060976 | CGP | 7955 | 3:9814733-9884599  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000060976  (CREBBP (1 of 3))CREB binding protein |
ENSDART00000091863 (CREBBP (1 of 3)-202)
|
9868817-9884599 | protein_coding | |
|
ENSDART00000115164 (CREBBP (1 of 3)-201)
|
9865824-9884599 | protein_coding | ||
|
ENSDARG00000089242 (trap1) TNF receptor-associated protein 1 |
ENSDART00000124450 (trap1-202)
|
9814805-9851981 | protein_coding | |
|
ENSDART00000145548 (trap1-001)
|
9814733-9843192 | protein_coding | ||
| CIL_00029G_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000126602-ENSG00000005339 | CGP | 9606 | 16:3651639-3880726 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000005339 (CREBBP) CREB binding protein |
ENST00000262367 (CREBBP-001)
|
3725054-3880726 | protein_coding | |
|
ENST00000382070 (CREBBP-003)
|
3727539-3880120 | protein_coding | ||
|
ENST00000570939 (CREBBP-008)
|
3739614-3767832 | protein_coding | ||
|
ENST00000571763 (CREBBP-013)
|
3731908-3736999 | retained_intron | ||
|
ENST00000571826 (CREBBP-006)
|
3773636-3778172 | protein_coding | ||
|
ENST00000572134 (CREBBP-005)
|
3773636-3780867 | protein_coding | ||
|
ENST00000572569 (CREBBP-009)
|
3740443-3745654 | retained_intron | ||
|
ENST00000573517 (CREBBP-011)
|
3739446-3751808 | protein_coding | ||
|
ENST00000573672 (CREBBP-007)
|
3767302-3770703 | retained_intron | ||
|
ENST00000574740 (CREBBP-012)
|
3736508-3744957 | retained_intron | ||
|
ENST00000575237 (CREBBP-010)
|
3773740-3774746 | retained_intron | ||
|
ENST00000576720 (CREBBP-004)
|
3731911-3743468 | retained_intron | ||
|
ENSG00000126602 (TRAP1) TNF receptor-associated protein 1 |
ENST00000246957 (TRAP1-001)
|
3658037-3717597 | protein_coding | |
|
ENST00000538171 (TRAP1-003)
|
3658038-3717513 | protein_coding | ||
|
ENST00000570403 (TRAP1-009)
|
3689052-3717512 | nonsense_mediated_decay | ||
|
ENST00000570514 (TRAP1-015)
|
3674336-3676214 | retained_intron | ||
|
ENST00000571011 (TRAP1-007)
|
3686100-3717524 | nonsense_mediated_decay | ||
|
ENST00000571538 (TRAP1-010)
|
3679735-3691133 | protein_coding | ||
|
ENST00000571804 (TRAP1-008)
|
3677498-3717516 | nonsense_mediated_decay | ||
|
ENST00000573872 (TRAP1-012)
|
3666026-3677650 | processed_transcript | ||
|
ENST00000574175 (TRAP1-013)
|
3672802-3677570 | nonsense_mediated_decay | ||
|
ENST00000574494 (TRAP1-017)
|
3658038-3662267 | retained_intron | ||
|
ENST00000574941 (TRAP1-006)
|
3678285-3717526 | processed_transcript | ||
|
ENST00000575671 (TRAP1-004)
|
3658038-3678304 | protein_coding | ||
|
ENST00000575707 (TRAP1-016)
|
3651639-3661990 | nonsense_mediated_decay | ||
|
ENST00000575854 (TRAP1-011)
|
3674656-3677658 | processed_transcript | ||
|
ENST00000576106 (TRAP1-005)
|
3678366-3717553 | processed_transcript | ||
|
ENST00000576335 (TRAP1-018)
|
3666082-3689075 | protein_coding | ||
|
ENST00000576788 (TRAP1-014)
|
3676094-3676946 | processed_transcript | ||
|
ENSG00000262516 (RP11-95J11.1) |
ENST00000572774 (RP11-95J11.1-001)
|
3840528-3841010 | processed_pseudogene | |
|
ENSG00000276754 (RP11-461A8.5) |
ENST00000622137 (RP11-461A8.5-001)
|
3686998-3687380 | antisense | |
| CIL_00029G_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000005981-ENSMUSG00000022521 | CGP | 10090 | 16:4039971-4213407 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000005980 (Dnase1) deoxyribonuclease I |
ENSMUST00000006136 (Dnase1-004)
|
4036970-4040024 | protein_coding | |
|
ENSMUST00000120009 (Dnase1-001)
|
4037031-4040024 | protein_coding | ||
|
ENSMUST00000125961 (Dnase1-003)
|
4037101-4040024 | retained_intron | ||
|
ENSMUST00000132466 (Dnase1-008)
|
4038222-4038871 | retained_intron | ||
|
ENSMUST00000137748 (Dnase1-005)
|
4036942-4039256 | protein_coding | ||
|
ENSMUST00000144792 (Dnase1-002)
|
4037098-4040023 | retained_intron | ||
|
ENSMUST00000149670 (Dnase1-007)
|
4037276-4038260 | retained_intron | ||
|
ENSMUST00000157044 (Dnase1-006)
|
4036973-4038021 | protein_coding | ||
|
ENSMUST00000175755 (Dnase1-011)
|
4039130-4040024 | protein_coding | ||
|
ENSMUST00000176642 (Dnase1-009)
|
4037304-4039339 | retained_intron | ||
|
ENSMUST00000177337 (Dnase1-010)
|
4037155-4039875 | nonsense_mediated_decay | ||
|
ENSMUSG00000005981 (Trap1) TNF receptor-associated protein 1 |
ENSMUST00000006137 (Trap1-001)
|
4039971-4077827 | protein_coding | |
|
ENSMUST00000137945 (Trap1-004)
|
4040140-4044698 | processed_transcript | ||
|
ENSMUST00000138594 (Trap1-002)
|
4065330-4077827 | retained_intron | ||
|
ENSMUST00000150354 (Trap1-003)
|
4056416-4077775 | nonsense_mediated_decay | ||
|
ENSMUSG00000022521 (Crebbp) CREB binding protein |
ENSMUST00000023165 (Crebbp-001)
|
4081328-4213407 | protein_coding | |
|
ENSMUST00000191387 (Crebbp-002)
|
4086610-4089743 | retained_intron | ||
|
ENSMUSG00000093262 (Gm23413) predicted gene, 23413 |
ENSMUST00000175521 (Gm23413-201)
|
4057373-4057497 | miRNA | |
Expression Patterns
|
