C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CREB binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023165 Crebbp-001 ENSMUSG00000022521 10090 - 16:4081328-4213407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023165 9.163±4.70 15.477±4.02 6.097±3.20 4.192±1.06 8.705±4.22 9.193±2.54 2.974±0.83 6.895±1.30 2.598±0.53 10.149±1.62 1.943±0.35 8.421±3.21 4.067±1.34 3.844±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029G CIL_00029G_0003 CGP 16:4039971-4213407
CIL_00000C CIL_00000C_0003 CGP 16:4081328-4420498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000123 IDA histone acetyltransferase complex
GO:0000790 IEA nuclear chromatin
GO:0000940 IDA condensed chromosome outer kinetochore
GO:0000987 IEA core promoter proximal region sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0001191 IEA RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription
GO:0002039 IEA p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0016407 IDA acetyltransferase activity
GO:0016573 IEA histone acetylation
GO:0016604 IEA nuclear body
GO:0016605 ISO PML body
GO:0018076 IEA N-terminal peptidyl-lysine acetylation
GO:0030718 IMP germ-line stem cell maintenance
GO:0043426 IEA MRF binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087250 crebbpa-201 protein_coding Danio_rerio 0 1557
ENSDART00000148002 crebbpa-001 protein_coding Danio_rerio 0 1557
ENSDART00000091873 crebbpb-201 protein_coding Danio_rerio 0 1524
ENSDART00000115164 CREBBP (1 of 3)-201 protein_coding Danio_rerio 0 1447
ENSDART00000114629 ep300a-202 protein_coding Danio_rerio 0 1314
ENSDART00000156459 ep300b-001 protein_coding Danio_rerio 0 1173
ENSDART00000149691 ep300a-001 protein_coding Danio_rerio 0 977
ENSDART00000086768 ep300b-201 protein_coding Danio_rerio 0 907
ENST00000262367 CREBBP-001 protein_coding Homo_sapiens 0 9428
ENST00000263253 EP300-001 protein_coding Homo_sapiens 0 1513
ENST00000382070 CREBBP-003 protein_coding Homo_sapiens 0 7400
ENST00000570939 CREBBP-008 protein_coding Homo_sapiens 0 628
ENST00000571826 CREBBP-006 protein_coding Homo_sapiens 0 592
ENST00000572134 CREBBP-005 protein_coding Homo_sapiens 0 337
ENST00000572569 CREBBP-009 retained_intron Homo_sapiens 0 379
ENST00000573517 CREBBP-011 protein_coding Homo_sapiens 0 832
ENST00000574740 CREBBP-012 retained_intron Homo_sapiens 0 322
ENST00000575237 CREBBP-010 retained_intron Homo_sapiens 0 340
ENST00000576720 CREBBP-004 retained_intron Homo_sapiens 0 387

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