C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase type 13A3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022533 Atp13a3 10090 - 16:30312423-30388837 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061350 Atp13a3-001 30312423-30388530 protein_coding
  ENSMUST00000100013 Atp13a3-201 30312423-30388530 protein_coding
  ENSMUST00000136065 Atp13a3-002 30385893-30388837 retained_intron
  ENSMUST00000149882 Atp13a3-005 30354169-30357243 retained_intron
  ENSMUST00000153656 Atp13a3-004 30361651-30388485 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061350ENSMUST00000100013ENSMUST00000136065ENSMUST00000153656
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061350 2.872±0.96 N/A 2.628±0.23 1.439±0.39 4.074±1.23 6.181±1.38 0.849±0.18 5.588±0.86 7.464±1.92 7.869±0.18 N/A 4.797±2.17 10.056±2.47 2.201±0.91
ENSMUST00000100013 6.044±0.14 N/A 8.791±3.44 3.471±1.08 7.584±1.63 3.106±0.49 3.823±0.47 2.014±0.26 4.530±1.53 10.061±0.94 4.371±0.82 5.692±3.22 8.131±2.21 0.761±0.39
ENSMUST00000136065 N/A 42.818±7.27 N/A N/A 23.473±2.13 33.691±6.86 N/A 4.773±0.00 17.192±5.97 N/A N/A 34.808±21.05 N/A N/A
ENSMUST00000153656 N/A N/A N/A 10.998±0.00 N/A N/A N/A N/A N/A N/A N/A 24.744±0.00 39.391±0.00 3.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A1 CIL_0009A1_0002 VISTA 16:29828808-30430865
CIL_0000NC CIL_0000NC_0002 CGP 16:30307686-30388837
CIL_0000NB CIL_0000NB_0002 CGP 16:30312423-30550842

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076622 ATP13A3 ATPase type 13A3 protein_coding Danio_rerio
ENSDARG00000086642 CABZ01111935.1 ATPase type 13A3 protein_coding Danio_rerio
ENSDARG00000086695 ATPase type 13A3 protein_coding Danio_rerio
ENSDARG00000088983 ATPase type 13A3 protein_coding Danio_rerio
ENSG00000133657 ATP13A3 ATPase type 13A3 protein_coding Homo_sapiens

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