C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100013 Atp13a3-201 ENSMUSG00000022533 10090 - 16:30312423-30388530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100013
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100013 6.044±0.14 8.791±3.44 3.471±1.08 7.584±1.63 3.106±0.49 3.823±0.47 2.014±0.26 4.530±1.53 10.061±0.94 4.371±0.82 5.692±3.22 8.131±2.21 0.761±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A1 CIL_0009A1_0002 VISTA 16:29828808-30430865
CIL_0000NC CIL_0000NC_0002 CGP 16:30307686-30388837
CIL_0000NB CIL_0000NB_0002 CGP 16:30312423-30550842

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256031 ATP13A3-201 protein_coding Homo_sapiens 0 4126
ENST00000429136 ATP13A3-010 protein_coding Homo_sapiens 0 891
ENST00000439040 ATP13A3-001 protein_coding Homo_sapiens 0 4126
ENST00000461660 ATP13A3-011 retained_intron Homo_sapiens 0 804
ENST00000484023 ATP13A3-007 retained_intron Homo_sapiens 0 433
ENST00000485194 ATP13A3-006 retained_intron Homo_sapiens 0 713
ENST00000497567 ATP13A3-012 retained_intron Homo_sapiens 3e-35 152
ENST00000591344 ZNF850-001 protein_coding Homo_sapiens 0.0001 55
ENST00000614887 ZNF850-201 protein_coding Homo_sapiens 0.0001 55
ENST00000619199 ATP13A3-202 protein_coding Homo_sapiens 0 2431

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