C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear distribution gene E homolog 1 (A nidulans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022678 Nde1 10090 + 16:14163275-14192928 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023359 Nde1-001 14163275-14192928 protein_coding
  ENSMUST00000115795 Nde1-008 14163345-14192918 protein_coding
  ENSMUST00000117958 Nde1-006 14163287-14192828 protein_coding
  ENSMUST00000127801 Nde1-007 14163349-14190440 processed_transcript
  ENSMUST00000132316 Nde1-002 14163298-14192918 nonsense_mediated_decay
  ENSMUST00000133249 Nde1-003 14163304-14170829 retained_intron
  ENSMUST00000149232 Nde1-005 14183573-14190520 protein_coding
  ENSMUST00000156041 Nde1-004 14175127-14188397 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023359ENSMUST00000115795ENSMUST00000117958ENSMUST00000132316ENSMUST00000149232ENSMUST00000156041
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023359 6.125±2.66 2.334±0.00 15.241±0.00 8.317±4.55 3.662±0.00 N/A 6.882±1.72 4.021±1.32 13.719±11.91 7.747±3.29 4.690±0.55 11.988±5.38 13.877±6.30 2.603±1.12
ENSMUST00000115795 3.408±0.09 5.112±1.43 4.353±0.00 4.152±0.00 4.208±1.72 4.692±1.24 2.710±0.00 2.071±0.65 4.347±2.64 6.415±0.37 3.925±0.97 5.487±1.49 5.394±1.51 1.517±0.37
ENSMUST00000117958 N/A N/A N/A 6.213±0.00 N/A N/A 2.461±0.00 N/A N/A N/A 2.336±0.22 41.257±0.00 19.067±17.43 1.818±0.00
ENSMUST00000132316 9.018±2.05 5.007±1.60 N/A N/A 7.177±2.62 5.769±1.84 N/A 3.841±1.59 2.385±0.90 8.990±1.09 1.457±0.00 9.092±4.01 4.500±0.00 1.615±0.01
ENSMUST00000149232 10.893±0.00 11.527±2.05 N/A N/A 7.380±2.33 6.281±0.80 N/A N/A 4.477±0.26 N/A N/A 16.776±4.75 N/A N/A
ENSMUST00000156041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.009±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0002 CGP 16:14109166-14192928
CIL_0006MU CIL_0006MU_0002 CGP 16:14163275-14291408

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000132 IEA establishment of mitotic spindle orientation
GO:0000776 IEA kinetochore
GO:0001764 IMP neuron migration
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005815 IDA microtubule organizing center
GO:0005819 IDA spindle
GO:0005874 IEA microtubule
GO:0007020 IDA microtubule nucleation
GO:0007067 IEA mitotic nuclear division
GO:0007405 IMP neuroblast proliferation
GO:0008017 IMP microtubule binding
GO:0016020 IEA membrane
GO:0019904 IEA protein domain specific binding
GO:0021987 IGI cerebral cortex development
GO:0030900 IMP forebrain development
GO:0031023 IMP microtubule organizing center organization
GO:0031616 IDA spindle pole centrosome
GO:0042802 IPI identical protein binding
GO:0047496 IGI vesicle transport along microtubule
GO:0051298 IMP centrosome duplication
GO:0051303 IEA establishment of chromosome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037900 nde1 nudE nuclear distribution gene E homolog 1 (A. nidulans) protein_coding Danio_rerio
ENSG00000072864 NDE1 nudE neurodevelopment protein 1 protein_coding Homo_sapiens

Loading