C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear distribution gene E homolog 1 (A nidulans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156041 Nde1-004 ENSMUSG00000022678 10090 + 16:14175127-14188397 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000156041
Transcript ID Ovary
ENSMUST00000156041 24.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0002 CGP 16:14109166-14192928
CIL_0006MU CIL_0006MU_0002 CGP 16:14163275-14291408

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342673 NDE1-201 protein_coding Homo_sapiens 0 573
ENST00000396354 NDE1-001 protein_coding Homo_sapiens 0 573
ENST00000396355 NDE1-002 protein_coding Homo_sapiens 0 573
ENST00000570727 NDE1-004 protein_coding Homo_sapiens 0 193
ENST00000572756 NDE1-005 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000573203 NDE1-003 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000574163 NDE1-006 retained_intron Homo_sapiens 0 298
ENST00000619489 NDE1-201 protein_coding Homo_sapiens 0 573

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