C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon (alpha and beta) receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022967 Ifnar1 10090 + 16:91485238-91507441 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023689 Ifnar1-001 91485238-91507441 protein_coding
  ENSMUST00000117748 Ifnar1-004 91485264-91507441 protein_coding
  ENSMUST00000123196 Ifnar1-003 91485249-91507437 nonsense_mediated_decay
  ENSMUST00000129878 Ifnar1-005 91485336-91496174 protein_coding
  ENSMUST00000145008 Ifnar1-002 91485277-91491789 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023689ENSMUST00000117748ENSMUST00000123196ENSMUST00000129878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023689 12.885±3.91 4.826±1.89 11.516±1.41 12.229±7.06 10.262±4.26 5.615±1.49 3.823±1.35 9.025±2.47 7.809±2.58 14.009±1.39 2.394±0.65 8.602±4.12 17.003±7.52 2.574±1.09
ENSMUST00000117748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.839±0.00 3.578±1.11 N/A
ENSMUST00000123196 2.802±0.26 1.463±0.28 2.223±0.00 N/A 3.781±0.55 1.772±0.41 1.164±0.13 1.802±0.09 1.874±0.48 5.105±0.00 1.053±0.00 5.328±1.74 4.061±0.92 0.674±0.17
ENSMUST00000129878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.639±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0007I0 CIL_0007I0_0002 CGP 16:91406164-91507441
CIL_0003WY CIL_0003WY_0002 CGP 16:91485238-91565169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004904 IMP interferon receptor activity
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0019221 IMP cytokine-mediated signaling pathway
GO:0032729 IGI positive regulation of interferon-gamma production
GO:0042110 IGI T cell activation
GO:0045351 IMP type I interferon biosynthetic process
GO:0050718 IMP positive regulation of interleukin-1 beta secretion
GO:0051607 IMP defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078042 crfb5 cytokine receptor family member b5 protein_coding Danio_rerio
ENSG00000142166 IFNAR1 interferon (alpha, beta and omega) receptor 1 protein_coding Homo_sapiens

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