C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007I0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243646-ENSG00000142166 CGP 9606 21:33266358-33359862
GeneTranscriptPositionBiotype
ENSG00000142166 (IFNAR1)
interferon (alpha, beta and omega) receptor 1 		ENST00000270139 (IFNAR1-001) 33324904-33359862 protein_coding
ENST00000442071 (IFNAR1-003) 33324973-33345277 protein_coding
ENST00000493503 (IFNAR1-002) 33324477-33335611 processed_transcript
ENSG00000226501 (USF1P1)
upstream transcription factor 1 pseudogene 1 		ENST00000451645 (USF1P1-001) 33334571-33335096 processed_pseudogene
ENSG00000243646 (IL10RB)
interleukin 10 receptor, beta 		ENST00000290200 (IL10RB-001) 33266358-33297234 protein_coding
ENST00000422891 (IL10RB-003) 33266382-33296239 nonsense_mediated_decay
ENST00000451065 (IL10RB-004) 33276612-33296350 nonsense_mediated_decay
ENST00000493295 (IL10RB-002) 33267928-33296953 retained_intron
ENST00000498371 (IL10RB-005) 33268282-33288120 retained_intron
ENSG00000272659 (AP000295.10)
 ENST00000609556 (AP000295.10-001) 33309491-33310181 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007I0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022969-ENSMUSG00000022967 CGP 10090 16:91406164-91507441
GeneTranscriptPositionBiotype
ENSMUSG00000022967 (Ifnar1)
interferon (alpha and beta) receptor 1 		ENSMUST00000023689 (Ifnar1-001) 91485238-91507441 protein_coding
ENSMUST00000117748 (Ifnar1-004) 91485264-91507441 protein_coding
ENSMUST00000123196 (Ifnar1-003) 91485249-91507437 nonsense_mediated_decay
ENSMUST00000129878 (Ifnar1-005) 91485336-91496174 protein_coding
ENSMUST00000145008 (Ifnar1-002) 91485277-91491789 retained_intron
ENSMUSG00000022969 (Il10rb)
interleukin 10 receptor, beta 		ENSMUST00000023691 (Il10rb-001) 91406235-91425834 protein_coding
ENSMUST00000137612 (Il10rb-004) 91406444-91414632 processed_transcript
ENSMUST00000144215 (Il10rb-005) 91406320-91424924 nonsense_mediated_decay
ENSMUST00000152729 (Il10rb-003) 91406320-91420311 retained_intron
ENSMUST00000156133 (Il10rb-002) 91406164-91425822 nonsense_mediated_decay
ENSMUSG00000084866 (A930006K02Rik)
RIKEN cDNA A930006K02 gene 		ENSMUST00000149172 (A930006K02Rik-001) 91465104-91470121 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I0_0001ENSG00000142166ENST00000270139ENST00000442071ENST00000493503ENSG00000226501ENST00000451645ENSG00000243646ENST00000290200ENST00000422891ENST00000451065ENST00000493295ENST00000498371ENSG00000272659ENST00000609556CIL_0007I0_0002ENSMUSG00000022967ENSMUST00000023689ENSMUST00000117748ENSMUST00000123196ENSMUST00000129878ENSMUST00000145008ENSMUSG00000022969ENSMUST00000023691ENSMUST00000137612ENSMUST00000144215ENSMUST00000152729ENSMUST00000156133ENSMUSG00000084866ENSMUST00000149172
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I0_0001ENSG00000142166ENST00000270139ENSG00000226501ENST00000451645ENSG00000243646ENST00000290200ENST00000451065ENST00000493295ENSG00000272659ENST00000609556CIL_0007I0_0002ENSMUSG00000022967ENSMUST00000023689ENSMUST00000117748ENSMUST00000123196ENSMUST00000129878ENSMUSG00000022969ENSMUST00000023691ENSMUST00000144215ENSMUSG00000084866ENSMUST00000149172
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142166 ENST00000270139 14.932±0.00 7.160±0.00 3.708±0.00 4.870±1.79 7.614±2.86 6.946±3.67 3.111±1.96 7.299±0.12 8.418±2.84 8.318±2.39 1.693±0.75 5.331±0.89 9.506±1.96 5.238±2.08
ENST00000442071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226501 ENST00000451645 N/A 0.069±0.00 N/A 0.078±0.00 N/A N/A 0.293±0.00 N/A 0.031±0.00 0.831±0.00 0.061±0.00 0.093±0.00 N/A 0.064±0.00
ENSG00000243646 ENST00000290200 11.088±0.00 16.084±0.00 N/A 1.499±1.01 6.776±4.22 10.969±0.00 3.383±0.00 6.058±4.21 4.899±3.27 7.803±6.44 3.780±0.00 10.390±6.08 48.582±26.94 8.798±0.00
ENST00000422891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.840±0.00 34.655±0.00 2.409±0.00
ENST00000493295 N/A N/A N/A N/A N/A 1.184±0.00 N/A N/A N/A 1.844±0.00 N/A N/A N/A N/A
ENST00000498371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272659 ENST00000609556 0.092±0.00 0.221±0.00 N/A 0.297±0.00 0.237±0.00 N/A 0.027±0.00 0.271±0.00 0.149±0.00 0.131±0.00 N/A 0.223±0.06 0.109±0.00 0.125±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022967 ENSMUST00000023689 12.885±3.91 4.826±1.89 11.516±1.41 12.229±7.06 10.262±4.26 5.615±1.49 3.823±1.35 9.025±2.47 7.809±2.58 14.009±1.39 2.394±0.65 8.602±4.12 17.003±7.52 2.574±1.09
ENSMUST00000117748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.839±0.00 3.578±1.11 N/A
ENSMUST00000123196 2.802±0.26 1.463±0.28 2.223±0.00 N/A 3.781±0.55 1.772±0.41 1.164±0.13 1.802±0.09 1.874±0.48 5.105±0.00 1.053±0.00 5.328±1.74 4.061±0.92 0.674±0.17
ENSMUST00000129878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.639±0.00
ENSMUST00000145008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022969 ENSMUST00000023691 17.982±8.42 72.150±11.85 20.847±4.33 2.151±0.75 21.710±6.82 26.821±3.53 31.380±7.19 26.904±4.32 14.901±1.12 20.220±2.58 2.854±0.61 23.813±16.40 15.537±6.05 3.218±0.51
ENSMUST00000137612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.677±0.00 N/A N/A
ENSMUST00000152729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084866 ENSMUST00000149172 0.481±0.23 0.498±0.55 N/A 1.000±0.82 1.194±0.78 0.362±0.13 0.111±0.10 0.464±0.20 0.090±0.03 1.301±0.00 0.146±0.04 0.845±0.41 0.536±0.15 2.444±1.13

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